Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm37575-201ENSMUST00000195467 309 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Gm43717-201ENSMUST00000198684 310 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 AC134439.2-201ENSMUST00000221950 467 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 AC159885.1-201ENSMUST00000222221 199 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col1a1P11087 Gm8724-201ENSMUST00000081668 483 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Mir28a-201ENSMUST00000083560 86 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Col1a1P11087 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Col1a1P11087 Gm43715-201ENSMUST00000196307 2715 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Col1a1P11087 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Col1a1P11087 9430025C20Rik-201ENSMUST00000068663 2115 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Gm42888-201ENSMUST00000202425 4361 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm13310-201ENSMUST00000120962 1381 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col1a1P11087 Gm14816-201ENSMUST00000117174 294 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm9435-201ENSMUST00000120379 877 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm23791-201ENSMUST00000122553 293 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.18□□□□□ -1.74
Col1a1P11087 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC4.18□□□□□ -1.74
Col1a1P11087 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.18□□□□□ -1.74
Col1a1P11087 Gm22034-201ENSMUST00000157283 134 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm28263-201ENSMUST00000185884 400 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.18□□□□□ -1.74
Col1a1P11087 AC140785.1-201ENSMUST00000217782 383 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col1a1P11087 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col1a1P11087 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col1a1P11087 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col1a1P11087 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col1a1P11087 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
Col1a1P11087 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
Col1a1P11087 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col1a1P11087 Gm38375-201ENSMUST00000194610 2227 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col1a1P11087 Gm15361-201ENSMUST00000119320 444 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm15780-201ENSMUST00000121283 935 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm26607-201ENSMUST00000180661 867 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm5058-201ENSMUST00000187331 463 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm37560-201ENSMUST00000194289 1000 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm44393-201ENSMUST00000197418 138 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm7624-201ENSMUST00000209702 435 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Col1a1P11087 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.18□□□□□ -1.74
Col1a1P11087 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.18□□□□□ -1.74
Col1a1P11087 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.18□□□□□ -1.74
Col1a1P11087 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col1a1P11087 Gm38264-201ENSMUST00000194850 2032 ntBASIC4.17□□□□□ -1.74
Col1a1P11087 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Col1a1P11087 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col1a1P11087 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Col1a1P11087 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.17□□□□□ -1.74
Col1a1P11087 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Col1a1P11087 Gm43032-201ENSMUST00000197967 3123 ntBASIC4.17□□□□□ -1.74
Col1a1P11087 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Col1a1P11087 Gm12722-201ENSMUST00000118507 493 ntBASIC4.17□□□□□ -1.74
Col1a1P11087 Gm6762-201ENSMUST00000121769 289 ntBASIC4.17□□□□□ -1.74
Col1a1P11087 Gm11349-201ENSMUST00000122209 1116 ntBASIC4.17□□□□□ -1.74
Col1a1P11087 Gm23591-201ENSMUST00000157663 286 ntBASIC4.17□□□□□ -1.74
Col1a1P11087 Gm23855-201ENSMUST00000158377 135 ntBASIC4.17□□□□□ -1.74
Col1a1P11087 Gm6947-201ENSMUST00000186254 78 ntBASIC4.17□□□□□ -1.74
Col1a1P11087 Gm4035-201ENSMUST00000189445 399 ntTSL 3 BASIC4.17□□□□□ -1.74
Col1a1P11087 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col1a1P11087 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC4.17□□□□□ -1.74
Col1a1P11087 Gm5983-201ENSMUST00000197739 770 ntBASIC4.17□□□□□ -1.74
Col1a1P11087 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col1a1P11087 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.17□□□□□ -1.74
Col1a1P11087 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC4.17□□□□□ -1.74
Col1a1P11087 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col1a1P11087 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col1a1P11087 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.16□□□□□ -1.74
Col1a1P11087 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col1a1P11087 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col1a1P11087 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col1a1P11087 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
Col1a1P11087 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col1a1P11087 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.16□□□□□ -1.74
Col1a1P11087 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col1a1P11087 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.16□□□□□ -1.74
Col1a1P11087 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC4.16□□□□□ -1.74
Col1a1P11087 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.16□□□□□ -1.74
Col1a1P11087 Gm8106-201ENSMUST00000213123 523 ntBASIC4.16□□□□□ -1.74
Col1a1P11087 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col1a1P11087 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Col1a1P11087 Vaultrc5-201ENSMUST00000083211 143 ntBASIC4.16□□□□□ -1.74
Col1a1P11087 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col1a1P11087 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.16□□□□□ -1.74
Col1a1P11087 Gm44625-201ENSMUST00000207838 1561 ntBASIC4.16□□□□□ -1.74
Col1a1P11087 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col1a1P11087 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col1a1P11087 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.15□□□□□ -1.74
Col1a1P11087 Gm3665-201ENSMUST00000177214 2461 ntBASIC4.15□□□□□ -1.74
Col1a1P11087 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Col1a1P11087 Gm13100-201ENSMUST00000117157 1439 ntBASIC4.15□□□□□ -1.74
Col1a1P11087 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms