Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm4083-201ENSMUST00000207158 451 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm45710-201ENSMUST00000212847 215 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm7040-201ENSMUST00000223271 443 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 AC129541.1-201ENSMUST00000226940 523 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 AC098728.1-202ENSMUST00000226656 2198 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 AC154627.2-201ENSMUST00000227028 4669 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Hoxd3P09027 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
Hoxd3P09027 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Hoxd3P09027 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
Hoxd3P09027 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
Hoxd3P09027 Ccdc186-201ENSMUST00000076085 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Hoxd3P09027 Gm20342-201ENSMUST00000185480 9720 ntBASIC4.9□□□□□ -1.62
Hoxd3P09027 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Hoxd3P09027 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Hoxd3P09027 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Hoxd3P09027 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Hoxd3P09027 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Hoxd3P09027 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
Hoxd3P09027 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm12285-201ENSMUST00000117347 233 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm12852-201ENSMUST00000119478 719 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm11369-201ENSMUST00000120812 318 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm7670-201ENSMUST00000121272 641 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm11761-201ENSMUST00000121392 445 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm22814-201ENSMUST00000157452 104 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm25387-201ENSMUST00000157813 132 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm18953-201ENSMUST00000175694 300 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm20620-201ENSMUST00000177528 168 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Mir6367-201ENSMUST00000183385 102 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm37103-201ENSMUST00000191830 115 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm3351-201ENSMUST00000193454 505 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 Mir691-201ENSMUST00000199719 78 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm45002-201ENSMUST00000208045 120 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm35857-201ENSMUST00000212739 178 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm18016-201ENSMUST00000216119 801 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 AC157085.1-201ENSMUST00000216343 162 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm46332-202ENSMUST00000220320 516 ntTSL 3 BASIC4.9□□□□□ -1.63
Hoxd3P09027 AC122371.2-201ENSMUST00000220583 366 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC4.9□□□□□ -1.63
Hoxd3P09027 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.9□□□□□ -1.63
Hoxd3P09027 AC153794.2-201ENSMUST00000222650 550 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Mir3068-201ENSMUST00000083004 136 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 Osbpl9-219ENSMUST00000194478 2903 ntTSL 5 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm37767-201ENSMUST00000193239 1834 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
Hoxd3P09027 Gm37531-201ENSMUST00000191628 5415 ntBASIC4.9□□□□□ -1.63
Hoxd3P09027 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Hoxd3P09027 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Hoxd3P09027 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms