Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm5558-201ENSMUST00000178933 495 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm29588-201ENSMUST00000185738 298 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm7897-201ENSMUST00000193981 554 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm44474-201ENSMUST00000196525 127 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm43856-201ENSMUST00000197004 369 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm45409-201ENSMUST00000211486 252 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm31931-201ENSMUST00000219666 222 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 AC154257.2-201ENSMUST00000224166 340 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 AC114572.1-201ENSMUST00000227262 300 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Olfr782-201ENSMUST00000077024 945 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm6043-201ENSMUST00000099961 492 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.67□□□□□ -1.82
Trem1Q9JKE2 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm37626-201ENSMUST00000194332 4563 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm22273-201ENSMUST00000104040 132 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm25097-201ENSMUST00000104042 145 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm22498-201ENSMUST00000104497 86 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm7189-201ENSMUST00000119811 429 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm27543-201ENSMUST00000183562 177 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm19503-201ENSMUST00000187109 241 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm37290-201ENSMUST00000195775 339 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm45063-201ENSMUST00000203726 472 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm8423-201ENSMUST00000211387 607 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 AC156832.3-201ENSMUST00000215591 435 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 AC156803.1-201ENSMUST00000224407 820 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 AC154583.1-201ENSMUST00000224788 655 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm23460-201ENSMUST00000083258 109 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Mir325-201ENSMUST00000083491 98 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Mir342-201ENSMUST00000083502 99 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Cd59b-201ENSMUST00000090429 796 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm23058-201ENSMUST00000093703 107 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm13058-201ENSMUST00000117097 1435 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm37916-201ENSMUST00000192153 2435 ntBASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Trem1Q9JKE2 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Trem1Q9JKE2 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Trem1Q9JKE2 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.65□□□□□ -1.82
Trem1Q9JKE2 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Trem1Q9JKE2 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm25096-201ENSMUST00000104043 129 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm6429-201ENSMUST00000117144 475 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Defa-ps15-201ENSMUST00000118178 477 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm14795-201ENSMUST00000118461 471 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm6062-201ENSMUST00000120462 631 ntBASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC3.65□□□□□ -1.83
Trem1Q9JKE2 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 86.2 ms