Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm6058-201ENSMUST00000154261 399 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm7241-201ENSMUST00000159853 357 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm22108-201ENSMUST00000177961 106 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm24798-201ENSMUST00000179334 106 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Mir6960-201ENSMUST00000183449 61 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm20203-201ENSMUST00000192352 332 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm4859-201ENSMUST00000199625 787 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm7041-201ENSMUST00000201227 524 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm7468-201ENSMUST00000203900 652 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 AC129323.1-201ENSMUST00000216733 470 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm31931-201ENSMUST00000219666 222 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 AC154305.1-201ENSMUST00000224443 450 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 AC154738.1-201ENSMUST00000227054 368 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm6462-201ENSMUST00000081488 304 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm25147-201ENSMUST00000083030 105 ntBASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm16794-203ENSMUST00000185324 1490 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Lima1Q9ERG0 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
Lima1Q9ERG0 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Lima1Q9ERG0 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm23481-201ENSMUST00000104173 131 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm15313-201ENSMUST00000119179 282 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm11645-201ENSMUST00000121589 649 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm15075-201ENSMUST00000122187 477 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm24850-201ENSMUST00000158029 119 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Mir6963-201ENSMUST00000183535 71 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm27445-201ENSMUST00000184484 72 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm37293-201ENSMUST00000191658 295 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm38061-201ENSMUST00000192490 365 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm43424-201ENSMUST00000200484 253 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm40598-201ENSMUST00000222953 547 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 AC122448.1-201ENSMUST00000226317 772 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Olfr194-203ENSMUST00000216519 3705 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Gm37652-201ENSMUST00000195290 2095 ntBASIC3.71□□□□□ -1.82
Lima1Q9ERG0 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm11566-201ENSMUST00000118550 203 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm22588-201ENSMUST00000157510 140 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm22726-201ENSMUST00000158089 179 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm17153-201ENSMUST00000171314 490 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Mir6414-201ENSMUST00000183685 82 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm17916-202ENSMUST00000187634 1187 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm45727-201ENSMUST00000212886 572 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 CT030194.2-201ENSMUST00000225752 379 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm26226-201ENSMUST00000082509 116 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm23518-201ENSMUST00000082835 153 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.7□□□□□ -1.82
Lima1Q9ERG0 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Lima1Q9ERG0 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms