Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Rpa3Q9CQ71 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm18493-201ENSMUST00000192084 1612 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm25169-201ENSMUST00000104190 129 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm22676-201ENSMUST00000116972 129 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm15387-201ENSMUST00000120421 648 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm24244-201ENSMUST00000157317 130 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm25427-201ENSMUST00000157605 103 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm27189-201ENSMUST00000184119 190 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm28500-201ENSMUST00000190286 151 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm37698-201ENSMUST00000192605 463 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Trbv28-201ENSMUST00000192804 264 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm4501-201ENSMUST00000207330 551 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm4558-201ENSMUST00000207886 521 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Olfr790-204ENSMUST00000218901 1070 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm5518-201ENSMUST00000084171 648 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Rpa3Q9CQ71 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm23959-201ENSMUST00000157208 324 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm24059-201ENSMUST00000157493 312 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm23782-201ENSMUST00000157939 120 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm25553-201ENSMUST00000158076 79 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm26028-201ENSMUST00000158660 294 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm25369-201ENSMUST00000158848 132 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm36934-201ENSMUST00000192007 306 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm18429-201ENSMUST00000198707 421 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm44583-201ENSMUST00000207478 281 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm19269-201ENSMUST00000211401 804 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm45379-201ENSMUST00000211772 549 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm2059-201ENSMUST00000212025 287 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm25205-201ENSMUST00000082841 103 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Mir27a-201ENSMUST00000083510 87 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Gm10704-201ENSMUST00000098952 730 ntBASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Rpa3Q9CQ71 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Mir690-201ENSMUST00000102110 109 ntBASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Mir147-201ENSMUST00000102354 79 ntBASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Gm13650-201ENSMUST00000117729 433 ntBASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Gm6797-201ENSMUST00000119440 512 ntBASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Gm21742-201ENSMUST00000189352 548 ntBASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Gm38080-201ENSMUST00000194035 268 ntBASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.87□□□□□ -1.79
Rpa3Q9CQ71 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms