Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm22419-201ENSMUST00000178780 121 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm24802-201ENSMUST00000178897 121 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm25208-201ENSMUST00000178964 121 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm24567-201ENSMUST00000179294 121 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm23943-201ENSMUST00000179712 121 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm25228-201ENSMUST00000180121 121 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm23304-201ENSMUST00000180209 121 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm28017-201ENSMUST00000183434 126 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm20885-201ENSMUST00000190192 654 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm28396-201ENSMUST00000190309 379 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm29740-201ENSMUST00000193182 655 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm36866-201ENSMUST00000193343 657 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm36047-201ENSMUST00000193659 657 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm20857-201ENSMUST00000194766 657 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm20858-201ENSMUST00000195459 657 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm42625-201ENSMUST00000198611 922 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm45382-201ENSMUST00000210607 151 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Olfr589-202ENSMUST00000218483 966 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm36372-201ENSMUST00000221011 778 ntTSL 5 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 CT030194.2-201ENSMUST00000225752 379 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Diaph3-206ENSMUST00000226745 713 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 AC192088.3-201ENSMUST00000227858 831 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm4963-201ENSMUST00000072718 378 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm25187-201ENSMUST00000083906 133 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ccdc9Q8VC31 AC132336.1-201ENSMUST00000222844 1740 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm36960-201ENSMUST00000195491 2035 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm24067-201ENSMUST00000104514 85 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Sult2a4-201ENSMUST00000108520 984 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Defb42-202ENSMUST00000111203 567 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm12598-201ENSMUST00000117333 830 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm15385-201ENSMUST00000118725 667 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm2318-201ENSMUST00000119623 639 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm11407-201ENSMUST00000120362 1058 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm12486-201ENSMUST00000120887 541 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm11891-201ENSMUST00000121241 619 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm14623-201ENSMUST00000121398 603 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm14800-201ENSMUST00000122084 1272 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm23959-201ENSMUST00000157208 324 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Mir3062-201ENSMUST00000174986 105 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm7438-201ENSMUST00000177664 639 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm7408-201ENSMUST00000178014 639 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm7386-201ENSMUST00000178020 639 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm3657-201ENSMUST00000178170 639 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm7415-201ENSMUST00000178205 639 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm7398-201ENSMUST00000178589 639 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm7391-201ENSMUST00000178680 639 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm7375-201ENSMUST00000179232 639 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm3681-201ENSMUST00000179940 639 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm28688-201ENSMUST00000187301 268 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm37578-201ENSMUST00000192256 1177 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm7897-201ENSMUST00000193981 554 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm43601-201ENSMUST00000196294 945 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm43730-201ENSMUST00000199863 372 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm7825-201ENSMUST00000204046 416 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm44773-201ENSMUST00000207374 557 ntBASIC5.28□□□□□ -1.56
Ccdc9Q8VC31 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC5.28□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms