Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC4.83□□□□□ -1.64
CopaQ8CIE6 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.83□□□□□ -1.64
CopaQ8CIE6 AC168059.2-201ENSMUST00000224473 333 ntBASIC4.83□□□□□ -1.64
CopaQ8CIE6 AC114916.1-201ENSMUST00000228465 494 ntBASIC4.83□□□□□ -1.64
CopaQ8CIE6 AC168062.2-201ENSMUST00000228907 422 ntBASIC4.83□□□□□ -1.64
CopaQ8CIE6 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CopaQ8CIE6 Mir421-201ENSMUST00000083575 76 ntBASIC4.83□□□□□ -1.64
CopaQ8CIE6 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CopaQ8CIE6 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CopaQ8CIE6 Gm43092-201ENSMUST00000202986 1854 ntBASIC4.83□□□□□ -1.64
CopaQ8CIE6 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CopaQ8CIE6 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CopaQ8CIE6 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CopaQ8CIE6 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CopaQ8CIE6 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CopaQ8CIE6 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm19074-201ENSMUST00000218915 1429 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC4.82□□□□□ -1.64
CopaQ8CIE6 AC169038.1-201ENSMUST00000227378 1352 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Mir466n-201ENSMUST00000104798 94 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm13865-201ENSMUST00000120957 865 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm14506-201ENSMUST00000121165 536 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm22601-201ENSMUST00000157595 250 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm23046-201ENSMUST00000158369 284 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm24551-201ENSMUST00000158645 92 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm16589-201ENSMUST00000159522 918 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm5263-201ENSMUST00000163646 601 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm22776-201ENSMUST00000178634 94 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm23767-201ENSMUST00000179278 94 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm29259-201ENSMUST00000186396 694 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm4412-201ENSMUST00000186660 433 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm28648-201ENSMUST00000190092 343 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm42643-201ENSMUST00000200504 279 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm4714-201ENSMUST00000203395 279 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm32536-201ENSMUST00000205209 445 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 AC131720.3-201ENSMUST00000219113 275 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.82□□□□□ -1.64
CopaQ8CIE6 AC120540.1-201ENSMUST00000221879 324 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 AC167192.1-201ENSMUST00000225908 139 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm25147-201ENSMUST00000083030 105 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CopaQ8CIE6 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm42494-201ENSMUST00000196515 3051 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.82□□□□□ -1.64
CopaQ8CIE6 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CopaQ8CIE6 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CopaQ8CIE6 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CopaQ8CIE6 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm42942-201ENSMUST00000196086 1328 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CopaQ8CIE6 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CopaQ8CIE6 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CopaQ8CIE6 Mir676-201ENSMUST00000102443 89 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm24469-201ENSMUST00000104487 131 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm15148-201ENSMUST00000117602 156 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm13379-201ENSMUST00000118053 621 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm11843-201ENSMUST00000118984 425 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm15387-201ENSMUST00000120421 648 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm22343-201ENSMUST00000122648 286 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CopaQ8CIE6 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CopaQ8CIE6 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm5558-201ENSMUST00000178933 495 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm28118-201ENSMUST00000185957 294 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm9569-201ENSMUST00000187492 787 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm37164-201ENSMUST00000192809 637 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 AC136146.1-201ENSMUST00000196180 91 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm44523-201ENSMUST00000205616 417 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 Gm17838-201ENSMUST00000205872 876 ntBASIC4.81□□□□□ -1.64
CopaQ8CIE6 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CopaQ8CIE6 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC4.81□□□□□ -1.64
CopaQ8CIE6 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms