Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm23022-201ENSMUST00000158768 180 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Gm3084-201ENSMUST00000169967 598 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Gm18604-201ENSMUST00000172535 558 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Gm25037-201ENSMUST00000175418 110 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Mir6907-201ENSMUST00000183764 71 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Gm27414-201ENSMUST00000185033 381 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Gm9375-201ENSMUST00000208899 903 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Gm7639-201ENSMUST00000212608 484 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 CT030662.2-201ENSMUST00000226942 805 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Gm37831-201ENSMUST00000191685 1787 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Neat1-201ENSMUST00000173672 20771 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.33□□□□□ -1.56
Vps53Q8CCB4 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm43888-201ENSMUST00000204405 2587 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm24935-201ENSMUST00000103770 110 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm22019-201ENSMUST00000104359 96 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm15752-201ENSMUST00000117427 394 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm12231-201ENSMUST00000119447 695 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm15157-201ENSMUST00000121852 702 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm25806-201ENSMUST00000122782 122 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm16250-201ENSMUST00000148974 256 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm17154-201ENSMUST00000165748 431 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm21070-201ENSMUST00000182425 985 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm27976-201ENSMUST00000183635 162 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm27163-201ENSMUST00000184767 409 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm43810-201ENSMUST00000201018 232 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm44050-201ENSMUST00000204263 527 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm45007-201ENSMUST00000206237 366 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm29817-201ENSMUST00000210098 172 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm18252-203ENSMUST00000215855 757 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC5.32□□□□□ -1.56
Vps53Q8CCB4 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 AC130823.2-201ENSMUST00000226169 290 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 AC112972.1-201ENSMUST00000227329 365 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm25140-201ENSMUST00000083254 140 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 AC124446.1-201ENSMUST00000221027 2644 ntBASIC5.32□□□□□ -1.56
Vps53Q8CCB4 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm24124-201ENSMUST00000104103 132 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm12448-201ENSMUST00000118852 655 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm14725-201ENSMUST00000120324 828 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm14881-201ENSMUST00000120366 372 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm2182-201ENSMUST00000145243 663 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm22793-201ENSMUST00000157227 330 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm22819-201ENSMUST00000157445 303 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm26352-201ENSMUST00000158223 125 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm25923-201ENSMUST00000158312 138 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm4854-201ENSMUST00000185902 574 ntBASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC5.31□□□□□ -1.56
Vps53Q8CCB4 Gm37272-201ENSMUST00000193401 488 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms