Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Trim9Q8C7M3 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm15493-201ENSMUST00000119461 528 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm14887-201ENSMUST00000119522 663 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm14725-201ENSMUST00000120324 828 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm15168-201ENSMUST00000121057 316 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm16060-201ENSMUST00000153140 478 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Mir6411-201ENSMUST00000183556 108 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Mir7056-201ENSMUST00000183776 59 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm8676-201ENSMUST00000184206 637 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm27457-201ENSMUST00000184771 156 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm28191-201ENSMUST00000189112 211 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm44319-201ENSMUST00000196974 93 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm42999-201ENSMUST00000198049 786 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm17956-201ENSMUST00000199931 838 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 AC124569.1-201ENSMUST00000225932 101 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 AC131178.1-201ENSMUST00000228649 492 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Olfr881-201ENSMUST00000074611 948 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Gm42946-201ENSMUST00000196108 2570 ntBASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Trim9Q8C7M3 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Trim9Q8C7M3 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm38106-201ENSMUST00000194107 2534 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm15624-203ENSMUST00000204811 3402 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5□□□□□ -1.61
Trim9Q8C7M3 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim9Q8C7M3 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim9Q8C7M3 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm14358-201ENSMUST00000118458 403 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm14229-201ENSMUST00000121178 850 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm23069-201ENSMUST00000158240 311 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm25525-201ENSMUST00000177701 107 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm26178-201ENSMUST00000177706 107 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm26465-201ENSMUST00000178517 107 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm24317-201ENSMUST00000178536 107 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm22243-201ENSMUST00000178754 120 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm25021-201ENSMUST00000179184 107 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm22995-201ENSMUST00000179670 107 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm24424-201ENSMUST00000179714 107 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm24389-201ENSMUST00000179962 107 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm25672-201ENSMUST00000180111 107 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim9Q8C7M3 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm29163-201ENSMUST00000188029 107 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm20997-201ENSMUST00000205148 231 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm45236-201ENSMUST00000208632 229 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 AC117240.2-201ENSMUST00000220921 263 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5□□□□□ -1.61
Trim9Q8C7M3 AC164437.2-201ENSMUST00000228915 797 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm23815-201ENSMUST00000083231 107 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm23520-201ENSMUST00000093736 107 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Trim9Q8C7M3 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm13310-201ENSMUST00000120962 1381 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Gm29730-201ENSMUST00000192986 1396 ntBASIC5□□□□□ -1.61
Trim9Q8C7M3 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim9Q8C7M3 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim9Q8C7M3 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Trim9Q8C7M3 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Trim9Q8C7M3 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
Trim9Q8C7M3 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim9Q8C7M3 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim9Q8C7M3 AC154627.2-201ENSMUST00000227028 4669 ntBASIC4.99□□□□□ -1.61
Trim9Q8C7M3 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Trim9Q8C7M3 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim9Q8C7M3 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Trim9Q8C7M3 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim9Q8C7M3 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Trim9Q8C7M3 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms