Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm26320-201ENSMUST00000157742 306 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm29097-201ENSMUST00000190273 422 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm6680-201ENSMUST00000192789 950 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 AC106830.1-201ENSMUST00000228032 1003 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm8724-201ENSMUST00000081668 483 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm37250-201ENSMUST00000194919 2388 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm14788-201ENSMUST00000119457 375 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm22538-201ENSMUST00000158169 299 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm37288-201ENSMUST00000193963 334 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm45344-201ENSMUST00000211610 341 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 AL669916.5-201ENSMUST00000214874 361 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm43751-201ENSMUST00000200275 3071 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm44860-201ENSMUST00000208473 2346 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Olfr1331-202ENSMUST00000106360 3230 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Calcrl-202ENSMUST00000099944 3973 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm14681-201ENSMUST00000118047 411 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm13831-201ENSMUST00000118764 302 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm15142-201ENSMUST00000121013 856 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm23380-201ENSMUST00000158448 103 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm16563-201ENSMUST00000162673 423 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm44690-201ENSMUST00000207984 382 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 BC023105-201ENSMUST00000073997 1227 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Olfr698-204ENSMUST00000216255 4024 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 AC131068.3-201ENSMUST00000228438 1456 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm22310-201ENSMUST00000157509 116 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm22910-201ENSMUST00000178568 132 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm27532-201ENSMUST00000183726 113 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Mir6916-201ENSMUST00000184514 63 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm29484-201ENSMUST00000186067 324 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm43315-201ENSMUST00000198120 313 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Gm5649-201ENSMUST00000217918 951 ntBASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Col6a6Q8C6K9 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Gm23964-201ENSMUST00000157966 107 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Gm29045-201ENSMUST00000187278 698 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Ighv1-46-201ENSMUST00000193988 351 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Gm24350-202ENSMUST00000198309 132 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Vaultrc5-201ENSMUST00000083211 143 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Mir1198-201ENSMUST00000116995 121 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Gm13664-201ENSMUST00000117304 345 ntBASIC3.17□□□□□ -1.9
Col6a6Q8C6K9 Gm6274-201ENSMUST00000118173 797 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms