Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm30738-201ENSMUST00000221346 502 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 CT009713.9-201ENSMUST00000223604 389 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm15095-201ENSMUST00000118996 1430 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Gm38125-201ENSMUST00000194136 3438 ntBASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Usp40Q8BWR4 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm11512-201ENSMUST00000119669 663 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm16445-201ENSMUST00000120399 714 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm5646-201ENSMUST00000120568 714 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm11321-201ENSMUST00000121257 902 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm9613-201ENSMUST00000171662 196 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm17919-201ENSMUST00000173344 312 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm15143-201ENSMUST00000178180 714 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Mir3473f-201ENSMUST00000183743 136 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm28474-201ENSMUST00000188501 315 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm29460-201ENSMUST00000188607 714 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm28788-201ENSMUST00000189717 375 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm29558-201ENSMUST00000190134 375 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm19131-201ENSMUST00000203408 789 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm45392-201ENSMUST00000210441 214 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm5023-201ENSMUST00000217442 587 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 AC152951.1-201ENSMUST00000218907 266 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm35558-202ENSMUST00000221819 499 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 AC149588.1-201ENSMUST00000228274 3745 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Gm43654-201ENSMUST00000200664 3417 ntBASIC6.37□□□□□ -1.39
Usp40Q8BWR4 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Usp40Q8BWR4 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm24430-201ENSMUST00000104077 104 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm13743-201ENSMUST00000121486 724 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm14530-201ENSMUST00000122391 333 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Mup-ps12-201ENSMUST00000126217 549 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm2855-201ENSMUST00000166765 456 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm27942-201ENSMUST00000184669 101 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm21803-201ENSMUST00000188897 693 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm4734-201ENSMUST00000200117 777 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm43922-201ENSMUST00000205071 328 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm10264-201ENSMUST00000220589 429 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC6.36□□□□□ -1.39
Usp40Q8BWR4 AC124489.2-201ENSMUST00000223930 589 ntBASIC6.36□□□□□ -1.39
Usp40Q8BWR4 CT030705.1-201ENSMUST00000223971 533 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms