Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm13356-201ENSMUST00000121678 335 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm26255-201ENSMUST00000122492 103 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm16331-201ENSMUST00000144274 498 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm7846-201ENSMUST00000145844 274 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Scarna6-201ENSMUST00000158656 265 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm26579-201ENSMUST00000181656 918 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Mir7012-201ENSMUST00000183900 64 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm29596-201ENSMUST00000185710 385 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Scgb2b6-201ENSMUST00000188132 330 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm2147-201ENSMUST00000193588 639 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim56Q80VI1 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 AC139758.1-201ENSMUST00000226573 930 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Olfr197-201ENSMUST00000080031 926 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm6645-201ENSMUST00000118505 2726 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm37890-201ENSMUST00000195610 3992 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm42537-201ENSMUST00000198260 2574 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm14128-201ENSMUST00000119514 1011 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm14605-201ENSMUST00000120599 268 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm11761-201ENSMUST00000121392 445 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm22725-201ENSMUST00000158092 110 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm8161-201ENSMUST00000168739 481 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm20397-201ENSMUST00000174520 362 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Mir6416-201ENSMUST00000183664 117 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm29389-201ENSMUST00000191562 352 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm9134-201ENSMUST00000193186 551 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm9442-201ENSMUST00000194242 319 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm2676-201ENSMUST00000207279 606 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm7128-201ENSMUST00000211639 533 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 AC154296.2-201ENSMUST00000214696 545 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm7034-201ENSMUST00000218638 645 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Olfr151-202ENSMUST00000221099 929 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm9512-201ENSMUST00000223112 497 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Gm45160-201ENSMUST00000207112 3099 ntBASIC6.05□□□□□ -1.44
Trim56Q80VI1 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Trim56Q80VI1 Ift80-208ENSMUST00000169064 4064 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm37606-201ENSMUST00000191816 3116 ntBASIC6.04□□□□□ -1.44
Trim56Q80VI1 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm25419-201ENSMUST00000104215 191 ntBASIC6.04□□□□□ -1.44
Trim56Q80VI1 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm14995-201ENSMUST00000117135 391 ntBASIC6.04□□□□□ -1.44
Trim56Q80VI1 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Trim56Q80VI1 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm43724-201ENSMUST00000197516 226 ntBASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm45081-201ENSMUST00000206281 572 ntBASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm18850-201ENSMUST00000211578 388 ntBASIC6.04□□□□□ -1.44
Trim56Q80VI1 AC159380.1-201ENSMUST00000218096 121 ntBASIC6.04□□□□□ -1.44
Trim56Q80VI1 CT030238.1-201ENSMUST00000228393 442 ntBASIC6.04□□□□□ -1.44
Trim56Q80VI1 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Trim56Q80VI1 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm26330-201ENSMUST00000082817 104 ntBASIC6.04□□□□□ -1.44
Trim56Q80VI1 Gm22741-201ENSMUST00000083438 165 ntBASIC6.04□□□□□ -1.44
Trim56Q80VI1 n-R5s170-201ENSMUST00000083726 113 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms