Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Ddx55Q6ZPL9 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm37726-201ENSMUST00000193246 3886 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm11898-201ENSMUST00000117161 385 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm12427-201ENSMUST00000117719 302 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm13865-201ENSMUST00000120957 865 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm14848-201ENSMUST00000121850 467 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm25264-201ENSMUST00000158519 117 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm20673-201ENSMUST00000177167 430 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm8676-201ENSMUST00000184206 637 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm8069-201ENSMUST00000197887 154 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Gm18414-201ENSMUST00000210858 694 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 AC069561.3-201ENSMUST00000217321 114 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 AC123062.1-201ENSMUST00000221287 481 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 AC162857.1-201ENSMUST00000226614 400 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 AC107369.1-201ENSMUST00000227373 860 ntBASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Ddx55Q6ZPL9 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Rgsl1-201ENSMUST00000124558 3642 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Zscan4-ps3-201ENSMUST00000210559 2277 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm22091-201ENSMUST00000116908 127 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm11393-201ENSMUST00000118019 288 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm11357-201ENSMUST00000119758 954 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm24949-201ENSMUST00000183609 215 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm4557-201ENSMUST00000185826 907 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm4526-201ENSMUST00000186039 920 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm28560-201ENSMUST00000186091 315 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm6802-202ENSMUST00000186566 126 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm28334-201ENSMUST00000186653 315 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm28495-201ENSMUST00000188452 315 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm8708-201ENSMUST00000188500 906 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm28232-201ENSMUST00000188683 315 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm28481-201ENSMUST00000189231 315 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm29059-201ENSMUST00000191534 315 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm30280-201ENSMUST00000192214 262 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm37765-201ENSMUST00000192395 315 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm37237-201ENSMUST00000192893 315 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm36968-201ENSMUST00000193737 315 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm38290-201ENSMUST00000195238 315 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm42830-201ENSMUST00000196642 313 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 CT030662.1-201ENSMUST00000227380 232 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Snord59a-201ENSMUST00000082844 74 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 AC144772.1-201ENSMUST00000226372 2398 ntBASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Ddx55Q6ZPL9 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 106.3 ms