Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm12293-201ENSMUST00000121898 590 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm14804-201ENSMUST00000122322 508 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm22819-201ENSMUST00000157445 303 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm15838-201ENSMUST00000161575 180 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm26177-201ENSMUST00000178683 107 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm27699-201ENSMUST00000183553 180 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm27887-201ENSMUST00000184367 102 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm28995-201ENSMUST00000186625 261 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm37503-201ENSMUST00000192088 319 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm17990-201ENSMUST00000211728 553 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm36501-201ENSMUST00000221857 745 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 CT010506.2-201ENSMUST00000225618 183 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.59□□□□□ -1.51
Sh3rf1Q69ZI1 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Sh3rf1Q69ZI1 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Sh3rf1Q69ZI1 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Sh3rf1Q69ZI1 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Sh3rf1Q69ZI1 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Sh3rf1Q69ZI1 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Sh3rf1Q69ZI1 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.59□□□□□ -1.52
Sh3rf1Q69ZI1 Gm18360-201ENSMUST00000173327 1524 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Catsperg1-212ENSMUST00000169143 3670 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm19113-201ENSMUST00000217552 1828 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm22021-201ENSMUST00000104353 107 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm13085-201ENSMUST00000118356 171 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm12739-201ENSMUST00000119769 382 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm13537-201ENSMUST00000120467 267 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm13533-201ENSMUST00000121104 177 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm13214-201ENSMUST00000122137 408 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm25706-201ENSMUST00000157828 247 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm25048-201ENSMUST00000158598 91 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm16566-201ENSMUST00000160387 910 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm18343-201ENSMUST00000172802 604 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm23648-201ENSMUST00000180301 107 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm29332-201ENSMUST00000190829 227 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm38015-201ENSMUST00000193048 188 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm38167-201ENSMUST00000195704 1178 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm19202-201ENSMUST00000198096 808 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm44580-201ENSMUST00000206333 877 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm45402-201ENSMUST00000211796 223 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm23627-201ENSMUST00000082459 107 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm22502-201ENSMUST00000082488 107 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm24149-201ENSMUST00000082757 107 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm23506-201ENSMUST00000083077 107 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Sh3rf1Q69ZI1 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms