Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim28Q62318 AC154241.1-201ENSMUST00000223952 356 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim28Q62318 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim28Q62318 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Trim28Q62318 Gm6195-201ENSMUST00000063059 357 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Trim28Q62318 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
Trim28Q62318 Gm22043-201ENSMUST00000082993 158 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim28Q62318 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim28Q62318 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim28Q62318 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim28Q62318 Gm7451-201ENSMUST00000208382 1392 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim28Q62318 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Trim28Q62318 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim28Q62318 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim28Q62318 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC5.76□□□□□ -1.49
Trim28Q62318 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim28Q62318 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Trim28Q62318 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim28Q62318 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim28Q62318 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim28Q62318 Gm12313-201ENSMUST00000121347 421 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 Klra11-ps-201ENSMUST00000122033 810 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC5.75□□□□□ -1.49
Trim28Q62318 Gm13194-201ENSMUST00000142299 311 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim28Q62318 Gm25447-201ENSMUST00000158997 128 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC5.75□□□□□ -1.49
Trim28Q62318 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim28Q62318 Gm3191-201ENSMUST00000167139 346 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim28Q62318 Gm28740-201ENSMUST00000186142 215 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim28Q62318 Gm44354-201ENSMUST00000196017 143 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim28Q62318 Gm9373-201ENSMUST00000208724 599 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC5.75□□□□□ -1.49
Trim28Q62318 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim28Q62318 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.75□□□□□ -1.49
Trim28Q62318 AC133654.1-201ENSMUST00000228411 672 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim28Q62318 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim28Q62318 Olfr729-201ENSMUST00000061020 972 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim28Q62318 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim28Q62318 Pi15-201ENSMUST00000088476 6923 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Trim28Q62318 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.75□□□□□ -1.49
Trim28Q62318 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
Trim28Q62318 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Trim28Q62318 AC153729.4-201ENSMUST00000217582 3826 ntBASIC5.75□□□□□ -1.49
Trim28Q62318 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim28Q62318 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim28Q62318 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim28Q62318 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
Trim28Q62318 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim28Q62318 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
Trim28Q62318 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.74□□□□□ -1.49
Trim28Q62318 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
Trim28Q62318 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim28Q62318 Gm5943-201ENSMUST00000119458 459 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm12252-201ENSMUST00000119517 219 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm15848-202ENSMUST00000125056 832 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim28Q62318 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Trim28Q62318 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim28Q62318 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Trim28Q62318 Gm25839-201ENSMUST00000158921 103 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC5.74□□□□□ -1.49
Trim28Q62318 Mir3104-201ENSMUST00000174911 63 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Mir5106-201ENSMUST00000174936 73 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm19898-201ENSMUST00000177490 251 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim28Q62318 Gm26092-201ENSMUST00000179798 97 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
Trim28Q62318 Mir669a-1-201ENSMUST00000180238 97 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm26652-202ENSMUST00000181672 475 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm27834-201ENSMUST00000183427 125 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm27659-201ENSMUST00000183472 98 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm20811-201ENSMUST00000190500 553 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm37889-201ENSMUST00000194174 251 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm43856-201ENSMUST00000197004 369 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm42850-201ENSMUST00000202094 201 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm5995-201ENSMUST00000204107 1273 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm44032-201ENSMUST00000204841 166 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
Trim28Q62318 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC5.74□□□□□ -1.49
Trim28Q62318 Gm45434-201ENSMUST00000210550 293 ntBASIC5.74□□□□□ -1.49
Trim28Q62318 Olfr790-204ENSMUST00000218901 1070 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms