Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VcanQ62059 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.3□□□□□ -1.88
VcanQ62059 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VcanQ62059 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
VcanQ62059 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
VcanQ62059 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC3.3□□□□□ -1.88
VcanQ62059 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
VcanQ62059 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
VcanQ62059 AC152981.1-201ENSMUST00000218320 2480 ntBASIC3.3□□□□□ -1.88
VcanQ62059 Mir291a-201ENSMUST00000104815 82 ntBASIC3.3□□□□□ -1.88
VcanQ62059 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VcanQ62059 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VcanQ62059 Gm8641-201ENSMUST00000186995 826 ntBASIC3.3□□□□□ -1.88
VcanQ62059 Gm37030-201ENSMUST00000194254 295 ntBASIC3.3□□□□□ -1.88
VcanQ62059 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.3□□□□□ -1.88
VcanQ62059 AC153564.2-201ENSMUST00000219464 273 ntBASIC3.3□□□□□ -1.88
VcanQ62059 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.3□□□□□ -1.88
VcanQ62059 Gm18617-201ENSMUST00000222311 259 ntBASIC3.3□□□□□ -1.88
VcanQ62059 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.3□□□□□ -1.88
VcanQ62059 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VcanQ62059 Mir410-201ENSMUST00000083563 81 ntBASIC3.3□□□□□ -1.88
VcanQ62059 Gm3665-201ENSMUST00000177214 2461 ntBASIC3.3□□□□□ -1.88
VcanQ62059 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VcanQ62059 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.3□□□□□ -1.88
VcanQ62059 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
VcanQ62059 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
VcanQ62059 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
VcanQ62059 Gm9427-201ENSMUST00000116187 651 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Gm5762-201ENSMUST00000119204 258 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Gm3757-201ENSMUST00000125878 675 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Gm14389-201ENSMUST00000140453 241 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Gm24441-201ENSMUST00000157235 281 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Gm22227-201ENSMUST00000157356 259 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Gm25866-201ENSMUST00000158245 112 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.29□□□□□ -1.88
VcanQ62059 Gm8392-201ENSMUST00000185647 835 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VcanQ62059 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.29□□□□□ -1.88
VcanQ62059 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC3.29□□□□□ -1.88
VcanQ62059 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VcanQ62059 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VcanQ62059 Fbxw23-202ENSMUST00000198480 1388 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
VcanQ62059 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
VcanQ62059 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
VcanQ62059 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Gm12571-201ENSMUST00000118132 243 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.29□□□□□ -1.88
VcanQ62059 Gm22849-201ENSMUST00000157713 307 ntBASIC3.29□□□□□ -1.88
VcanQ62059 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VcanQ62059 Gm18843-201ENSMUST00000194982 719 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Gm20177-201ENSMUST00000203705 334 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Gm44688-201ENSMUST00000209083 537 ntBASIC3.29□□□□□ -1.88
VcanQ62059 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.29□□□□□ -1.88
VcanQ62059 AC154738.4-201ENSMUST00000228310 414 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VcanQ62059 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VcanQ62059 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
VcanQ62059 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
VcanQ62059 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.29□□□□□ -1.88
VcanQ62059 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
VcanQ62059 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VcanQ62059 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
VcanQ62059 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VcanQ62059 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
VcanQ62059 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
VcanQ62059 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC3.29□□□□□ -1.88
VcanQ62059 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.29□□□□□ -1.88
VcanQ62059 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
VcanQ62059 Gm37946-201ENSMUST00000192064 347 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.29□□□□□ -1.88
VcanQ62059 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
VcanQ62059 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.29□□□□□ -1.88
VcanQ62059 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.29□□□□□ -1.88
VcanQ62059 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.29□□□□□ -1.88
VcanQ62059 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
VcanQ62059 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
VcanQ62059 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC3.28□□□□□ -1.88
VcanQ62059 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.28□□□□□ -1.88
VcanQ62059 Gm13311-201ENSMUST00000117863 379 ntBASIC3.28□□□□□ -1.88
VcanQ62059 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.28□□□□□ -1.88
VcanQ62059 Gm6510-201ENSMUST00000195916 574 ntBASIC3.28□□□□□ -1.88
VcanQ62059 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.28□□□□□ -1.88
VcanQ62059 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
VcanQ62059 Gm30534-201ENSMUST00000217928 207 ntBASIC3.28□□□□□ -1.88
VcanQ62059 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VcanQ62059 Gm25205-201ENSMUST00000082841 103 ntBASIC3.28□□□□□ -1.88
VcanQ62059 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC3.28□□□□□ -1.88
VcanQ62059 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
VcanQ62059 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC3.28□□□□□ -1.88
VcanQ62059 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
VcanQ62059 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
VcanQ62059 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.28□□□□□ -1.88
VcanQ62059 Gm29563-201ENSMUST00000187249 496 ntBASIC3.28□□□□□ -1.88
VcanQ62059 Gm29334-201ENSMUST00000190334 357 ntBASIC3.28□□□□□ -1.88
VcanQ62059 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
VcanQ62059 Gm26476-201ENSMUST00000122618 313 ntBASIC3.28□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms