Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Foxc1Q61572 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Usp17lb-201ENSMUST00000076501 1407 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 AC107645.1-201ENSMUST00000228660 1810 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm23748-201ENSMUST00000104227 131 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm15164-201ENSMUST00000122203 271 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm5699-201ENSMUST00000152491 723 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm26350-201ENSMUST00000157531 288 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm23892-201ENSMUST00000158105 130 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm3191-201ENSMUST00000167139 346 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm20545-201ENSMUST00000174739 210 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm27851-201ENSMUST00000183529 63 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm27152-201ENSMUST00000183828 99 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm412-201ENSMUST00000193360 948 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm6077-201ENSMUST00000196008 499 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm18453-201ENSMUST00000208000 626 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm45626-201ENSMUST00000210093 361 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC4.82□□□□□ -1.64
Foxc1Q61572 AC112680.2-201ENSMUST00000213119 595 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC4.82□□□□□ -1.64
Foxc1Q61572 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Foxc1Q61572 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Foxc1Q61572 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC4.82□□□□□ -1.64
Foxc1Q61572 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Foxc1Q61572 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 AC161247.1-201ENSMUST00000217744 2295 ntBASIC4.81□□□□□ -1.64
Foxc1Q61572 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC4.81□□□□□ -1.64
Foxc1Q61572 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 Pramef8-202ENSMUST00000059790 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Foxc1Q61572 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC4.81□□□□□ -1.64
Foxc1Q61572 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Foxc1Q61572 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 CT009757.4-201ENSMUST00000221520 2541 ntBASIC4.81□□□□□ -1.64
Foxc1Q61572 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
Foxc1Q61572 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Foxc1Q61572 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
Foxc1Q61572 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 Mir708-201ENSMUST00000102189 109 ntBASIC4.81□□□□□ -1.64
Foxc1Q61572 Gm24867-201ENSMUST00000104161 107 ntBASIC4.81□□□□□ -1.64
Foxc1Q61572 Gm11698-201ENSMUST00000117948 455 ntBASIC4.81□□□□□ -1.64
Foxc1Q61572 Gm11445-201ENSMUST00000119101 532 ntBASIC4.81□□□□□ -1.64
Foxc1Q61572 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.81□□□□□ -1.64
Foxc1Q61572 Gm5166-201ENSMUST00000121332 573 ntBASIC4.81□□□□□ -1.64
Foxc1Q61572 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.81□□□□□ -1.64
Foxc1Q61572 Gm12778-201ENSMUST00000122341 333 ntBASIC4.81□□□□□ -1.64
Foxc1Q61572 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.81□□□□□ -1.64
Foxc1Q61572 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC4.81□□□□□ -1.64
Foxc1Q61572 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Foxc1Q61572 Gm25395-201ENSMUST00000157343 272 ntBASIC4.81□□□□□ -1.64
Foxc1Q61572 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC4.81□□□□□ -1.64
Foxc1Q61572 Gm20615-201ENSMUST00000177503 705 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms