Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm25037-201ENSMUST00000175418 110 ntBASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Gm9775-201ENSMUST00000189402 331 ntBASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Gm38069-201ENSMUST00000195360 2144 ntBASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Gm43651-201ENSMUST00000199796 439 ntBASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Gm4991-201ENSMUST00000118899 1552 ntBASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 BC055308-201ENSMUST00000193380 2538 ntBASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Gm11408-201ENSMUST00000117889 519 ntBASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Gm36382-201ENSMUST00000198892 541 ntBASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Gm43217-201ENSMUST00000199513 367 ntBASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.28□□□□□ -1.72
Ccdc88aQ5SNZ0 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.28□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.28□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 AC144783.2-201ENSMUST00000219089 195 ntBASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm37900-201ENSMUST00000195510 3805 ntBASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm22750-201ENSMUST00000102076 103 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm23697-201ENSMUST00000103897 110 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm24118-201ENSMUST00000103972 126 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm15361-201ENSMUST00000119320 444 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm25860-201ENSMUST00000158252 126 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm16300-201ENSMUST00000160031 1279 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm26141-201ENSMUST00000175299 126 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Mir7k-201ENSMUST00000184115 110 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm44393-201ENSMUST00000197418 138 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 AC104897.1-201ENSMUST00000222638 3628 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 AC154386.1-201ENSMUST00000222753 2871 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm37320-201ENSMUST00000192781 4953 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Mir290a-201ENSMUST00000104627 83 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm25539-201ENSMUST00000116886 122 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm11746-201ENSMUST00000119843 821 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm23753-201ENSMUST00000157575 149 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm5829-201ENSMUST00000191383 351 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm36934-201ENSMUST00000192007 306 ntBASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr1098-201ENSMUST00000099872 948 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ccdc88aQ5SNZ0 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ccdc88aQ5SNZ0 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms