Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Gm42537-201ENSMUST00000198260 2574 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm42993-201ENSMUST00000196856 7325 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 AC121997.2-203ENSMUST00000228613 4192 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm3623-201ENSMUST00000173643 2747 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm13118-201ENSMUST00000120402 549 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm18522-201ENSMUST00000173947 650 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm38008-201ENSMUST00000195333 518 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm44649-201ENSMUST00000205608 364 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm23407-201ENSMUST00000082538 91 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm24626-201ENSMUST00000082621 161 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Mir27a-201ENSMUST00000083510 87 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Olfr713-201ENSMUST00000098139 975 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm37862-201ENSMUST00000193079 2533 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC4.04□□□□□ -1.76
Upf3bQ3ULL6 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm23116-201ENSMUST00000158481 67 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm24976-201ENSMUST00000158972 135 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm10357-201ENSMUST00000159886 264 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm17091-201ENSMUST00000163248 357 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm3030-201ENSMUST00000163410 516 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm3339-201ENSMUST00000163462 475 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm21816-201ENSMUST00000179255 360 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm29408-201ENSMUST00000187536 216 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm28625-201ENSMUST00000188309 205 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm44403-201ENSMUST00000198554 129 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm45539-201ENSMUST00000210313 428 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm6929-201ENSMUST00000210930 468 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm2059-201ENSMUST00000212025 287 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Gm43508-201ENSMUST00000197251 3783 ntBASIC4.03□□□□□ -1.76
Upf3bQ3ULL6 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Upf3bQ3ULL6 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.77
Upf3bQ3ULL6 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm43793-201ENSMUST00000201645 1333 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 AC163296.2-201ENSMUST00000220177 1315 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm26418-201ENSMUST00000104275 137 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm15613-201ENSMUST00000118396 326 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm24930-201ENSMUST00000158315 83 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm22531-201ENSMUST00000158819 140 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Mir6715-201ENSMUST00000184990 57 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm37001-201ENSMUST00000193377 190 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Gm36985-201ENSMUST00000195595 379 ntBASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Upf3bQ3ULL6 AC159819.1-201ENSMUST00000213911 328 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms