Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 AC153801.1-201ENSMUST00000217904 947 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm21994-201ENSMUST00000063463 990 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm10042-201ENSMUST00000079884 78 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Gm42552-201ENSMUST00000196754 4497 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 AC155921.1-201ENSMUST00000216568 3841 ntBASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Trafd1Q3UDK1 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm13567-201ENSMUST00000118026 247 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm12252-201ENSMUST00000119517 219 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm22816-201ENSMUST00000157450 117 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm24014-201ENSMUST00000157728 157 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm10074-201ENSMUST00000174543 249 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm27828-201ENSMUST00000184108 119 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm43478-201ENSMUST00000200381 292 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm43090-201ENSMUST00000202459 314 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm31532-201ENSMUST00000203555 767 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm5655-201ENSMUST00000221078 901 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 AC154510.1-201ENSMUST00000223925 737 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.92□□□□□ -1.78
Trafd1Q3UDK1 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm7754-201ENSMUST00000223075 2064 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm4736-201ENSMUST00000100870 380 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Mir1193-201ENSMUST00000116761 121 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm22519-201ENSMUST00000158270 178 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm2862-201ENSMUST00000161524 328 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm22398-201ENSMUST00000174941 125 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm25731-201ENSMUST00000175167 125 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Mir5710-201ENSMUST00000176884 69 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm20673-201ENSMUST00000177167 430 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm28471-201ENSMUST00000185994 615 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm18547-201ENSMUST00000192439 811 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm38334-201ENSMUST00000195060 313 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm42451-201ENSMUST00000197410 244 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Mir129b-201ENSMUST00000197461 65 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm6590-201ENSMUST00000203343 687 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm10297-201ENSMUST00000207136 651 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm17989-201ENSMUST00000211543 412 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 AC124524.2-201ENSMUST00000223940 588 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 CT025525.1-201ENSMUST00000226325 1054 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm25592-201ENSMUST00000082635 131 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm23518-201ENSMUST00000082835 153 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 AC091683.1-201ENSMUST00000222307 2446 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 AC131720.1-201ENSMUST00000218629 2132 ntBASIC3.91□□□□□ -1.78
Trafd1Q3UDK1 AC154323.3-201ENSMUST00000226927 1660 ntBASIC3.9□□□□□ -1.78
Trafd1Q3UDK1 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
Trafd1Q3UDK1 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 131.2 ms