Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Sox9Q04887 Gm18522-201ENSMUST00000173947 650 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Gm27568-201ENSMUST00000184220 99 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC5.32□□□□□ -1.56
Sox9Q04887 Gm28474-201ENSMUST00000188501 315 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC5.32□□□□□ -1.56
Sox9Q04887 Gm38053-201ENSMUST00000193938 160 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sox9Q04887 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC5.32□□□□□ -1.56
Sox9Q04887 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC5.32□□□□□ -1.56
Sox9Q04887 Gm18442-201ENSMUST00000220925 639 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC5.32□□□□□ -1.56
Sox9Q04887 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox9Q04887 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sox9Q04887 Snord22-201ENSMUST00000083153 126 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 n-R5s170-201ENSMUST00000083726 113 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Gm38067-201ENSMUST00000192346 1911 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox9Q04887 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox9Q04887 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.32□□□□□ -1.56
Sox9Q04887 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox9Q04887 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox9Q04887 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sox9Q04887 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Sox9Q04887 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.32□□□□□ -1.56
Sox9Q04887 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.32□□□□□ -1.56
Sox9Q04887 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Sox9Q04887 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox9Q04887 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sox9Q04887 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 Gm22758-201ENSMUST00000102275 96 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Sox9Q04887 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 Gm15687-201ENSMUST00000141440 269 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm24315-201ENSMUST00000177835 127 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm38041-201ENSMUST00000194445 661 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 Gm37418-201ENSMUST00000195031 274 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm42776-201ENSMUST00000198031 406 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm44650-201ENSMUST00000206929 194 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 AC102369.1-201ENSMUST00000218415 373 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Sox9Q04887 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox9Q04887 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm14393-201ENSMUST00000072895 625 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Sox9Q04887 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm22810-201ENSMUST00000082741 158 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox9Q04887 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC5.31□□□□□ -1.56
Sox9Q04887 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
Sox9Q04887 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.31□□□□□ -1.56
Sox9Q04887 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox9Q04887 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.31□□□□□ -1.56
Sox9Q04887 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Sox9Q04887 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Sox9Q04887 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sox9Q04887 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Mir761-201ENSMUST00000103245 76 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm6429-201ENSMUST00000117144 475 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm12427-201ENSMUST00000117719 302 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm14878-201ENSMUST00000118167 293 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm12268-201ENSMUST00000118398 442 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Zfp389-201ENSMUST00000118425 675 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm11679-201ENSMUST00000121830 779 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Zakit-201ENSMUST00000157677 308 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm24961-201ENSMUST00000157918 184 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm24186-201ENSMUST00000157983 127 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm8161-201ENSMUST00000168739 481 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Sox9Q04887 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm23568-201ENSMUST00000177960 92 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Sox9Q04887 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Sox9Q04887 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm24829-201ENSMUST00000179245 92 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Sox9Q04887 Gm21729-201ENSMUST00000180058 664 ntBASIC5.3□□□□□ -1.56
Sox9Q04887 Gm21853-201ENSMUST00000180071 664 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms