Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a1Q04857 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm11912-201ENSMUST00000117235 264 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm13733-201ENSMUST00000117290 535 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm15382-201ENSMUST00000118011 537 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm9059-201ENSMUST00000118319 183 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm11881-201ENSMUST00000119408 572 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm13213-201ENSMUST00000119668 474 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm13745-201ENSMUST00000121994 527 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC5.91□□□□□ -1.46
Col6a1Q04857 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Col6a1Q04857 Olfr753-ps1-202ENSMUST00000174673 919 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm45857-201ENSMUST00000212207 356 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm45727-201ENSMUST00000212886 572 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 CT030182.3-201ENSMUST00000225986 582 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Vmn1r211-201ENSMUST00000073728 985 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm23093-201ENSMUST00000083450 102 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a1Q04857 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a1Q04857 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a1Q04857 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Zbed4-ps1-201ENSMUST00000186734 3466 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm26691-202ENSMUST00000181952 4183 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Col6a1Q04857 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm19084-201ENSMUST00000222939 1762 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col6a1Q04857 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a1Q04857 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a1Q04857 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col6a1Q04857 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a1Q04857 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.9□□□□□ -1.46
Col6a1Q04857 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.9□□□□□ -1.46
Col6a1Q04857 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a1Q04857 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col6a1Q04857 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm25213-201ENSMUST00000102388 113 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm6923-201ENSMUST00000118343 406 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm14881-201ENSMUST00000120366 372 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm25176-201ENSMUST00000122640 125 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm24550-201ENSMUST00000158648 279 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col6a1Q04857 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm20794-201ENSMUST00000177626 628 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm5709-201ENSMUST00000177879 1165 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm2367-201ENSMUST00000192374 472 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm20162-201ENSMUST00000193629 871 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm6510-201ENSMUST00000195916 574 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm43717-201ENSMUST00000198684 310 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm44055-201ENSMUST00000204376 247 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.9□□□□□ -1.46
Col6a1Q04857 Gm44794-201ENSMUST00000206550 411 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 AL669916.3-201ENSMUST00000213855 94 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 AL669916.6-201ENSMUST00000214610 94 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 AL669916.4-201ENSMUST00000215976 94 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 AL669916.1-201ENSMUST00000217640 94 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a1Q04857 AC159256.1-201ENSMUST00000224298 1039 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 AC167013.2-202ENSMUST00000227035 333 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 AC158955.1-201ENSMUST00000227140 385 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col6a1Q04857 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.9□□□□□ -1.46
Col6a1Q04857 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Col6a1Q04857 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Col6a1Q04857 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.9□□□□□ -1.47
Col6a1Q04857 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
Col6a1Q04857 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.9□□□□□ -1.47
Col6a1Q04857 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Col6a1Q04857 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
Col6a1Q04857 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
Col6a1Q04857 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Col6a1Q04857 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a1Q04857 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a1Q04857 AC123705.3-201ENSMUST00000223531 2069 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm15182-201ENSMUST00000120832 1676 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Col6a1Q04857 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a1Q04857 4930532I03Rik-201ENSMUST00000218463 1724 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a1Q04857 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a1Q04857 AC112972.2-201ENSMUST00000228702 2210 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm37833-201ENSMUST00000194342 3256 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm22656-201ENSMUST00000104199 171 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm11447-201ENSMUST00000118983 858 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm25808-201ENSMUST00000122784 284 ntBASIC5.89□□□□□ -1.47
Col6a1Q04857 Gm23171-201ENSMUST00000157159 264 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms