Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.21□□□□□ -1.58
Msx2Q03358 Gm42758-201ENSMUST00000202146 283 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC5.21□□□□□ -1.58
Msx2Q03358 Gm45402-201ENSMUST00000211796 223 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.21□□□□□ -1.58
Msx2Q03358 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC5.21□□□□□ -1.58
Msx2Q03358 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Msx2Q03358 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
Msx2Q03358 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC5.21□□□□□ -1.58
Msx2Q03358 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 CT025689.4-201ENSMUST00000225926 601 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 AC122393.2-201ENSMUST00000226404 1093 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Gm4963-201ENSMUST00000072718 378 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Msx2Q03358 Gm26206-201ENSMUST00000082908 110 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Msx2Q03358 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Msx2Q03358 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Msx2Q03358 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Msx2Q03358 Gm42639-201ENSMUST00000197061 1871 ntBASIC5.21□□□□□ -1.58
Msx2Q03358 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Msx2Q03358 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Msx2Q03358 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.21□□□□□ -1.58
Msx2Q03358 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Msx2Q03358 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Msx2Q03358 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Msx2Q03358 Gm13085-201ENSMUST00000118356 171 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm14874-201ENSMUST00000118995 438 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm12413-201ENSMUST00000121508 312 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
Msx2Q03358 Gm25784-201ENSMUST00000122524 81 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Gm14012-201ENSMUST00000136025 677 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm24812-201ENSMUST00000175315 284 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm24303-201ENSMUST00000178237 126 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm21726-201ENSMUST00000179654 392 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Npn2-202ENSMUST00000189275 235 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm7858-201ENSMUST00000190177 622 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm28996-201ENSMUST00000190316 721 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm37455-201ENSMUST00000191993 529 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.2□□□□□ -1.58
Msx2Q03358 Gm37191-201ENSMUST00000193346 388 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.2□□□□□ -1.58
Msx2Q03358 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm8719-201ENSMUST00000203602 534 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm44768-201ENSMUST00000205719 393 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC5.2□□□□□ -1.58
Msx2Q03358 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 CT030184.1-201ENSMUST00000222393 416 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm23733-201ENSMUST00000083750 106 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm4017-201ENSMUST00000084813 338 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Olfr356-201ENSMUST00000095021 948 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Msx2Q03358 Gm42600-201ENSMUST00000202081 3588 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Msx2Q03358 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm44164-201ENSMUST00000203605 2561 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 AC121844.2-201ENSMUST00000219067 2066 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Msx2Q03358 Fus-202ENSMUST00000079045 2623 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.2□□□□□ -1.58
Msx2Q03358 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
Msx2Q03358 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Msx2Q03358 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Msx2Q03358 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Msx2Q03358 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.19□□□□□ -1.58
Msx2Q03358 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msx2Q03358 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Msx2Q03358 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
Msx2Q03358 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msx2Q03358 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msx2Q03358 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Msx2Q03358 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msx2Q03358 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Msx2Q03358 Gm14933-201ENSMUST00000118840 481 ntBASIC5.19□□□□□ -1.58
Msx2Q03358 Gm12646-201ENSMUST00000119144 238 ntBASIC5.19□□□□□ -1.58
Msx2Q03358 Gm14731-201ENSMUST00000119216 376 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms