Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm37001-201ENSMUST00000193377 190 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Nkx3-1P97436 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Nkx3-1P97436 AC129308.2-201ENSMUST00000224588 789 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Gm22423-201ENSMUST00000082861 184 ntBASIC3.32□□□□□ -1.88
Nkx3-1P97436 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nkx3-1P97436 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nkx3-1P97436 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Nkx3-1P97436 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.31□□□□□ -1.88
Nkx3-1P97436 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Gm25272-201ENSMUST00000104293 128 ntBASIC3.31□□□□□ -1.88
Nkx3-1P97436 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Gm13607-201ENSMUST00000117875 539 ntBASIC3.31□□□□□ -1.88
Nkx3-1P97436 Gm12577-201ENSMUST00000119701 574 ntBASIC3.31□□□□□ -1.88
Nkx3-1P97436 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Gm29334-201ENSMUST00000190334 357 ntBASIC3.31□□□□□ -1.88
Nkx3-1P97436 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Gm2142-201ENSMUST00000197899 589 ntBASIC3.31□□□□□ -1.88
Nkx3-1P97436 Gm45226-201ENSMUST00000206602 288 ntBASIC3.31□□□□□ -1.88
Nkx3-1P97436 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Olfr936-202ENSMUST00000216912 937 ntBASIC3.31□□□□□ -1.88
Nkx3-1P97436 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.31□□□□□ -1.88
Nkx3-1P97436 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.31□□□□□ -1.88
Nkx3-1P97436 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.31□□□□□ -1.88
Nkx3-1P97436 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Nkx3-1P97436 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nkx3-1P97436 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm44078-201ENSMUST00000204652 2646 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm23063-201ENSMUST00000102350 93 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm26273-201ENSMUST00000104180 131 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm15988-201ENSMUST00000118677 367 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm14739-201ENSMUST00000120424 802 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm14383-201ENSMUST00000121637 386 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm23957-201ENSMUST00000157209 90 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC3.3□□□□□ -1.88
Nkx3-1P97436 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.3□□□□□ -1.88
Nkx3-1P97436 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm43039-201ENSMUST00000202883 963 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm18944-201ENSMUST00000207672 643 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm19219-201ENSMUST00000215863 724 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC3.3□□□□□ -1.88
Nkx3-1P97436 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 AC132237.2-201ENSMUST00000221702 1209 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC3.3□□□□□ -1.88
Nkx3-1P97436 AC133101.1-201ENSMUST00000226939 1199 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Nkx3-1P97436 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Nkx3-1P97436 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC3.3□□□□□ -1.88
Nkx3-1P97436 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.29□□□□□ -1.88
Nkx3-1P97436 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Nkx3-1P97436 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Nkx3-1P97436 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Nkx3-1P97436 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.29□□□□□ -1.88
Nkx3-1P97436 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Nkx3-1P97436 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Nkx3-1P97436 Gm13687-201ENSMUST00000119857 282 ntBASIC3.29□□□□□ -1.88
Nkx3-1P97436 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
Nkx3-1P97436 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Nkx3-1P97436 Gm24550-201ENSMUST00000158648 279 ntBASIC3.29□□□□□ -1.88
Nkx3-1P97436 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Nkx3-1P97436 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Nkx3-1P97436 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC3.29□□□□□ -1.88
Nkx3-1P97436 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Nkx3-1P97436 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
Nkx3-1P97436 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC3.29□□□□□ -1.88
Nkx3-1P97436 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.29□□□□□ -1.88
Nkx3-1P97436 CT485612.3-201ENSMUST00000222179 408 ntBASIC3.29□□□□□ -1.88
Nkx3-1P97436 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms