Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Tpm1P58771 Gm25665-201ENSMUST00000157695 110 ntBASIC4.16□□□□□ -1.74
Tpm1P58771 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Tpm1P58771 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Tpm1P58771 Gm4207-201ENSMUST00000173144 960 ntBASIC4.16□□□□□ -1.74
Tpm1P58771 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Tpm1P58771 Gm23152-201ENSMUST00000175322 116 ntBASIC4.16□□□□□ -1.74
Tpm1P58771 Gm6625-201ENSMUST00000177870 272 ntBASIC4.16□□□□□ -1.74
Tpm1P58771 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Tpm1P58771 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4.16□□□□□ -1.74
Tpm1P58771 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.16□□□□□ -1.74
Tpm1P58771 Gm37878-201ENSMUST00000192108 387 ntBASIC4.16□□□□□ -1.74
Tpm1P58771 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Tpm1P58771 Gm18861-201ENSMUST00000202509 1186 ntBASIC4.16□□□□□ -1.74
Tpm1P58771 Gm45162-201ENSMUST00000209013 618 ntBASIC4.16□□□□□ -1.74
Tpm1P58771 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Tpm1P58771 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Tpm1P58771 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.16□□□□□ -1.74
Tpm1P58771 Gm23443-201ENSMUST00000082916 128 ntBASIC4.16□□□□□ -1.74
Tpm1P58771 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Tpm1P58771 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Tpm1P58771 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Tpm1P58771 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Tpm1P58771 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Tpm1P58771 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.16□□□□□ -1.74
Tpm1P58771 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC4.16□□□□□ -1.74
Tpm1P58771 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.16□□□□□ -1.74
Tpm1P58771 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC4.16□□□□□ -1.74
Tpm1P58771 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Tpm1P58771 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
Tpm1P58771 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Tpm1P58771 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Tpm1P58771 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Tpm1P58771 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Tpm1P58771 Gm14119-201ENSMUST00000119511 235 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 Gm12294-201ENSMUST00000119723 490 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 Gm11483-201ENSMUST00000119839 247 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 Gm11746-201ENSMUST00000119843 821 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC4.15□□□□□ -1.75
Tpm1P58771 Gm26476-201ENSMUST00000122618 313 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 Gm24550-201ENSMUST00000158648 279 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
Tpm1P58771 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Tpm1P58771 Snord92-201ENSMUST00000175548 85 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.15□□□□□ -1.75
Tpm1P58771 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Tpm1P58771 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.15□□□□□ -1.75
Tpm1P58771 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC4.15□□□□□ -1.75
Tpm1P58771 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC4.15□□□□□ -1.75
Tpm1P58771 Gm37575-201ENSMUST00000195467 309 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 Gm37836-201ENSMUST00000195875 175 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 Gm18791-201ENSMUST00000204611 726 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Tpm1P58771 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Tpm1P58771 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Tpm1P58771 Gm25200-201ENSMUST00000083094 130 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 Gm7676-201ENSMUST00000084055 319 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
Tpm1P58771 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC4.15□□□□□ -1.75
Tpm1P58771 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
Tpm1P58771 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Tpm1P58771 Gm37176-201ENSMUST00000193300 4051 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Tpm1P58771 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC4.14□□□□□ -1.75
Tpm1P58771 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Tpm1P58771 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Tpm1P58771 Gm13650-201ENSMUST00000117729 433 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Gm12190-201ENSMUST00000120001 187 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Gm11645-201ENSMUST00000121589 649 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Gm14695-201ENSMUST00000121721 282 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Gm11692-201ENSMUST00000122121 902 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC4.14□□□□□ -1.75
Tpm1P58771 Gm16571-201ENSMUST00000159112 291 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Gm6486-201ENSMUST00000166202 434 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Tpm1P58771 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC4.14□□□□□ -1.75
Tpm1P58771 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC4.14□□□□□ -1.75
Tpm1P58771 Gm27718-201ENSMUST00000183721 86 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Mir6398-201ENSMUST00000184541 102 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.14□□□□□ -1.75
Tpm1P58771 Gm37543-201ENSMUST00000192443 1031 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Igkv12-47-201ENSMUST00000196961 356 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Gm36382-201ENSMUST00000198892 541 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Tpm1P58771 Gm45689-201ENSMUST00000210522 133 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 AC117797.2-201ENSMUST00000224419 531 ntBASIC4.14□□□□□ -1.75
Tpm1P58771 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Tpm1P58771 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Tpm1P58771 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Tpm1P58771 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Tpm1P58771 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
Tpm1P58771 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Tpm1P58771 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Tpm1P58771 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC4.13□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms