Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm23305-201ENSMUST00000179342 79 ntBASIC4.47□□□□□ -1.69
NcanP55066 Gm26389-201ENSMUST00000179819 79 ntBASIC4.47□□□□□ -1.69
NcanP55066 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NcanP55066 Gm22130-201ENSMUST00000179979 79 ntBASIC4.47□□□□□ -1.69
NcanP55066 Gm22393-201ENSMUST00000180153 79 ntBASIC4.47□□□□□ -1.69
NcanP55066 Gm25085-201ENSMUST00000180298 79 ntBASIC4.47□□□□□ -1.69
NcanP55066 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NcanP55066 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC4.47□□□□□ -1.69
NcanP55066 Gm5829-201ENSMUST00000191383 351 ntBASIC4.47□□□□□ -1.69
NcanP55066 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NcanP55066 Gm37095-201ENSMUST00000195421 205 ntBASIC4.47□□□□□ -1.69
NcanP55066 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.47□□□□□ -1.69
NcanP55066 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.47□□□□□ -1.69
NcanP55066 Gm43825-201ENSMUST00000199650 734 ntBASIC4.47□□□□□ -1.69
NcanP55066 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.47□□□□□ -1.69
NcanP55066 Gm6929-201ENSMUST00000210930 468 ntBASIC4.47□□□□□ -1.69
NcanP55066 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
NcanP55066 AC139638.1-201ENSMUST00000218027 364 ntBASIC4.47□□□□□ -1.69
NcanP55066 AC118006.2-201ENSMUST00000224167 962 ntBASIC4.47□□□□□ -1.69
NcanP55066 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.47□□□□□ -1.69
NcanP55066 Gm25134-201ENSMUST00000082646 160 ntBASIC4.47□□□□□ -1.69
NcanP55066 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.47□□□□□ -1.69
NcanP55066 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NcanP55066 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
NcanP55066 Gm35755-201ENSMUST00000222392 2077 ntBASIC4.47□□□□□ -1.69
NcanP55066 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
NcanP55066 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
NcanP55066 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.46□□□□□ -1.69
NcanP55066 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NcanP55066 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NcanP55066 Gm42770-201ENSMUST00000199657 4155 ntBASIC4.46□□□□□ -1.7
NcanP55066 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.46□□□□□ -1.7
NcanP55066 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NcanP55066 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.46□□□□□ -1.7
NcanP55066 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NcanP55066 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NcanP55066 Gm12245-201ENSMUST00000117266 357 ntBASIC4.46□□□□□ -1.7
NcanP55066 Olfr1296-ps1-201ENSMUST00000117697 939 ntBASIC4.46□□□□□ -1.7
NcanP55066 Gm11403-201ENSMUST00000122195 369 ntBASIC4.46□□□□□ -1.7
NcanP55066 Gm14562-201ENSMUST00000129885 543 ntBASIC4.46□□□□□ -1.7
NcanP55066 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC4.46□□□□□ -1.7
NcanP55066 Gm25490-201ENSMUST00000158734 130 ntBASIC4.46□□□□□ -1.7
NcanP55066 Gm3025-201ENSMUST00000163454 489 ntBASIC4.46□□□□□ -1.7
NcanP55066 Samd15-201ENSMUST00000169669 1194 ntBASIC4.46□□□□□ -1.7
NcanP55066 Gm2878-201ENSMUST00000170173 486 ntBASIC4.46□□□□□ -1.7
NcanP55066 Gm22398-201ENSMUST00000174941 125 ntBASIC4.46□□□□□ -1.7
NcanP55066 Gm25731-201ENSMUST00000175167 125 ntBASIC4.46□□□□□ -1.7
NcanP55066 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.46□□□□□ -1.7
NcanP55066 Gm43774-201ENSMUST00000196327 878 ntBASIC4.46□□□□□ -1.7
NcanP55066 4930520M14Rik-201ENSMUST00000196947 701 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NcanP55066 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NcanP55066 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC4.46□□□□□ -1.7
NcanP55066 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NcanP55066 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC4.46□□□□□ -1.7
NcanP55066 Gm44256-201ENSMUST00000203304 335 ntBASIC4.46□□□□□ -1.7
NcanP55066 Gm43967-201ENSMUST00000203787 301 ntBASIC4.46□□□□□ -1.7
NcanP55066 Gm44779-201ENSMUST00000206937 708 ntBASIC4.46□□□□□ -1.7
NcanP55066 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.46□□□□□ -1.7
NcanP55066 Gm19181-201ENSMUST00000218891 940 ntBASIC4.46□□□□□ -1.7
NcanP55066 AC132465.3-201ENSMUST00000219326 195 ntBASIC4.46□□□□□ -1.7
NcanP55066 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NcanP55066 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NcanP55066 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NcanP55066 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
NcanP55066 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
NcanP55066 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NcanP55066 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
NcanP55066 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
NcanP55066 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NcanP55066 Gm17131-201ENSMUST00000164420 3846 ntBASIC4.45□□□□□ -1.7
NcanP55066 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NcanP55066 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NcanP55066 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
NcanP55066 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
NcanP55066 Gm44439-201ENSMUST00000203379 3592 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NcanP55066 Gm14890-201ENSMUST00000117660 676 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm13359-201ENSMUST00000119000 695 ntBASIC4.45□□□□□ -1.7
NcanP55066 Mup-ps21-201ENSMUST00000119998 448 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm14599-201ENSMUST00000120469 474 ntBASIC4.45□□□□□ -1.7
NcanP55066 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm12103-201ENSMUST00000121892 362 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.45□□□□□ -1.7
NcanP55066 Gm23587-201ENSMUST00000157658 84 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm22314-201ENSMUST00000158007 281 ntBASIC4.45□□□□□ -1.7
NcanP55066 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC4.45□□□□□ -1.7
NcanP55066 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm5058-201ENSMUST00000187331 463 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm7837-201ENSMUST00000190873 412 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm38166-201ENSMUST00000191660 471 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm17966-201ENSMUST00000193453 594 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm36943-201ENSMUST00000194422 282 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.45□□□□□ -1.7
NcanP55066 Gm31532-201ENSMUST00000203555 767 ntBASIC4.45□□□□□ -1.7
NcanP55066 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
NcanP55066 Gm17811-201ENSMUST00000206193 387 ntBASIC4.45□□□□□ -1.7
NcanP55066 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.45□□□□□ -1.7
NcanP55066 Gm5176-201ENSMUST00000218244 1227 ntBASIC4.45□□□□□ -1.7
NcanP55066 AC131677.1-201ENSMUST00000218721 535 ntBASIC4.45□□□□□ -1.7
NcanP55066 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms