Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Gm19366-201ENSMUST00000206996 156 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC3.63□□□□□ -1.83
Cdx2P43241 Gm21007-201ENSMUST00000221024 326 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Gm6562-201ENSMUST00000221903 464 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 AC132446.1-201ENSMUST00000222655 226 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Cdx2P43241 Gm26072-201ENSMUST00000083135 107 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdx2P43241 Gm37789-201ENSMUST00000192862 2889 ntBASIC3.63□□□□□ -1.83
Cdx2P43241 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Cdx2P43241 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Cdx2P43241 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Cdx2P43241 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdx2P43241 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 P2ry10-201ENSMUST00000053375 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx2P43241 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx2P43241 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx2P43241 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdx2P43241 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cdx2P43241 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
Cdx2P43241 Gm25168-201ENSMUST00000104189 132 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 Gm24067-201ENSMUST00000104514 85 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 Gm15026-201ENSMUST00000119219 458 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 Gm22219-201ENSMUST00000157562 319 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 Gm28591-201ENSMUST00000185259 183 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.62□□□□□ -1.83
Cdx2P43241 Gm36934-201ENSMUST00000192007 306 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx2P43241 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.62□□□□□ -1.83
Cdx2P43241 Gm44559-201ENSMUST00000207177 1012 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC3.62□□□□□ -1.83
Cdx2P43241 Gm45733-201ENSMUST00000212988 437 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cdx2P43241 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx2P43241 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdx2P43241 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdx2P43241 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Cdx2P43241 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx2P43241 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx2P43241 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.62□□□□□ -1.83
Cdx2P43241 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Cdx2P43241 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Cdx2P43241 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC3.61□□□□□ -1.83
Cdx2P43241 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.61□□□□□ -1.83
Cdx2P43241 Gm5347-201ENSMUST00000210542 2327 ntBASIC3.61□□□□□ -1.83
Cdx2P43241 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.61□□□□□ -1.83
Cdx2P43241 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cdx2P43241 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx2P43241 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdx2P43241 Gm23424-201ENSMUST00000103889 110 ntBASIC3.61□□□□□ -1.83
Cdx2P43241 Gm14586-201ENSMUST00000119571 408 ntBASIC3.61□□□□□ -1.83
Cdx2P43241 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC3.61□□□□□ -1.83
Cdx2P43241 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx2P43241 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC3.61□□□□□ -1.83
Cdx2P43241 AC135377.1-201ENSMUST00000223692 463 ntBASIC3.61□□□□□ -1.83
Cdx2P43241 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx2P43241 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdx2P43241 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Cdx2P43241 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.61□□□□□ -1.83
Cdx2P43241 Mir101b-201ENSMUST00000083622 97 ntBASIC3.61□□□□□ -1.83
Cdx2P43241 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx2P43241 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cdx2P43241 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cdx2P43241 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx2P43241 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.61□□□□□ -1.83
Cdx2P43241 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Cdx2P43241 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Cdx2P43241 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdx2P43241 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx2P43241 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdx2P43241 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx2P43241 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx2P43241 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx2P43241 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx2P43241 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx2P43241 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Cdx2P43241 Gm15180-201ENSMUST00000117745 492 ntBASIC3.6□□□□□ -1.83
Cdx2P43241 Gm15060-201ENSMUST00000119550 948 ntBASIC3.6□□□□□ -1.83
Cdx2P43241 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.6□□□□□ -1.83
Cdx2P43241 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC3.6□□□□□ -1.83
Cdx2P43241 Gm24244-201ENSMUST00000157317 130 ntBASIC3.6□□□□□ -1.83
Cdx2P43241 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.6□□□□□ -1.83
Cdx2P43241 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC3.6□□□□□ -1.83
Cdx2P43241 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC3.6□□□□□ -1.83
Cdx2P43241 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdx2P43241 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Cdx2P43241 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.6□□□□□ -1.83
Cdx2P43241 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.6□□□□□ -1.83
Cdx2P43241 Trbv8-201ENSMUST00000194020 285 ntBASIC3.6□□□□□ -1.83
Cdx2P43241 Gm2142-201ENSMUST00000197899 589 ntBASIC3.6□□□□□ -1.83
Cdx2P43241 Gm42824-201ENSMUST00000199361 247 ntBASIC3.6□□□□□ -1.83
Cdx2P43241 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms