Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
HttP42859 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HttP42859 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC3.72□□□□□ -1.81
HttP42859 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.72□□□□□ -1.81
HttP42859 Gm27505-201ENSMUST00000185071 110 ntBASIC3.72□□□□□ -1.81
HttP42859 Gm37030-201ENSMUST00000194254 295 ntBASIC3.72□□□□□ -1.81
HttP42859 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
HttP42859 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC3.72□□□□□ -1.81
HttP42859 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.72□□□□□ -1.81
HttP42859 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
HttP42859 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.72□□□□□ -1.81
HttP42859 Gm42478-201ENSMUST00000199252 1467 ntBASIC3.72□□□□□ -1.81
HttP42859 Gm14811-201ENSMUST00000117070 117 ntBASIC3.72□□□□□ -1.81
HttP42859 Gm17421-201ENSMUST00000167845 674 ntBASIC3.72□□□□□ -1.81
HttP42859 Gm29563-201ENSMUST00000187249 496 ntBASIC3.72□□□□□ -1.81
HttP42859 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
HttP42859 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
HttP42859 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
HttP42859 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC3.71□□□□□ -1.81
HttP42859 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
HttP42859 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
HttP42859 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
HttP42859 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
HttP42859 Gm25270-201ENSMUST00000122606 138 ntBASIC3.71□□□□□ -1.82
HttP42859 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HttP42859 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.71□□□□□ -1.82
HttP42859 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HttP42859 Mir3965-201ENSMUST00000175570 69 ntBASIC3.71□□□□□ -1.82
HttP42859 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HttP42859 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.71□□□□□ -1.82
HttP42859 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HttP42859 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
HttP42859 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HttP42859 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.71□□□□□ -1.82
HttP42859 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
HttP42859 Gm13310-201ENSMUST00000120962 1381 ntBASIC3.71□□□□□ -1.82
HttP42859 Gm26145-201ENSMUST00000104476 127 ntBASIC3.71□□□□□ -1.82
HttP42859 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC3.71□□□□□ -1.82
HttP42859 Gm8129-201ENSMUST00000118230 213 ntBASIC3.71□□□□□ -1.82
HttP42859 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC3.71□□□□□ -1.82
HttP42859 Gm17187-201ENSMUST00000164622 410 ntBASIC3.71□□□□□ -1.82
HttP42859 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HttP42859 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.71□□□□□ -1.82
HttP42859 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC3.71□□□□□ -1.82
HttP42859 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HttP42859 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
HttP42859 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
HttP42859 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.71□□□□□ -1.82
HttP42859 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
HttP42859 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
HttP42859 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HttP42859 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HttP42859 Gm2892-201ENSMUST00000145537 711 ntBASIC3.7□□□□□ -1.82
HttP42859 Gm22722-201ENSMUST00000157467 132 ntBASIC3.7□□□□□ -1.82
HttP42859 Gm22833-201ENSMUST00000158292 132 ntBASIC3.7□□□□□ -1.82
HttP42859 Gm38075-201ENSMUST00000191979 920 ntBASIC3.7□□□□□ -1.82
HttP42859 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
HttP42859 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HttP42859 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HttP42859 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HttP42859 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
HttP42859 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HttP42859 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HttP42859 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HttP42859 Gm5392-201ENSMUST00000122189 789 ntBASIC3.7□□□□□ -1.82
HttP42859 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.7□□□□□ -1.82
HttP42859 Gm27538-201ENSMUST00000185065 294 ntBASIC3.7□□□□□ -1.82
HttP42859 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC3.7□□□□□ -1.82
HttP42859 AC140451.2-202ENSMUST00000226156 574 ntBASIC3.7□□□□□ -1.82
HttP42859 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
HttP42859 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
HttP42859 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HttP42859 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HttP42859 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HttP42859 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.7□□□□□ -1.82
HttP42859 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.7□□□□□ -1.82
HttP42859 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HttP42859 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HttP42859 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HttP42859 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
HttP42859 Gm11387-201ENSMUST00000120266 772 ntBASIC3.7□□□□□ -1.82
HttP42859 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HttP42859 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HttP42859 Gm45149-201ENSMUST00000206459 2172 ntBASIC3.7□□□□□ -1.82
HttP42859 AC158938.1-201ENSMUST00000225372 6720 ntBASIC3.7□□□□□ -1.82
HttP42859 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC3.69□□□□□ -1.82
HttP42859 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HttP42859 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
HttP42859 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
HttP42859 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HttP42859 Gm26342-201ENSMUST00000104557 129 ntBASIC3.69□□□□□ -1.82
HttP42859 Gm20656-201ENSMUST00000176925 518 ntBASIC3.69□□□□□ -1.82
HttP42859 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.69□□□□□ -1.82
HttP42859 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HttP42859 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
HttP42859 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HttP42859 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HttP42859 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HttP42859 Gm25866-201ENSMUST00000158245 112 ntBASIC3.69□□□□□ -1.82
HttP42859 Gm27893-201ENSMUST00000184408 194 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms