Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AC137871.2-201ENSMUST00000226482 289 ntBASIC4.14□□□□□ -1.75
Col2a1P28481 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col2a1P28481 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Col2a1P28481 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Col2a1P28481 Gm45093-201ENSMUST00000206859 2463 ntBASIC4.14□□□□□ -1.75
Col2a1P28481 AC126033.1-201ENSMUST00000227628 6773 ntBASIC4.14□□□□□ -1.75
Col2a1P28481 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.14□□□□□ -1.75
Col2a1P28481 Gm42614-201ENSMUST00000198724 1554 ntBASIC4.14□□□□□ -1.75
Col2a1P28481 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC4.14□□□□□ -1.75
Col2a1P28481 Gm37236-201ENSMUST00000193670 3249 ntBASIC4.14□□□□□ -1.75
Col2a1P28481 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col2a1P28481 Gm23755-201ENSMUST00000157578 343 ntBASIC4.13□□□□□ -1.75
Col2a1P28481 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC4.13□□□□□ -1.75
Col2a1P28481 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.13□□□□□ -1.75
Col2a1P28481 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC4.13□□□□□ -1.75
Col2a1P28481 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC4.13□□□□□ -1.75
Col2a1P28481 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col2a1P28481 Gm18903-201ENSMUST00000215343 480 ntBASIC4.13□□□□□ -1.75
Col2a1P28481 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Col2a1P28481 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Col2a1P28481 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col2a1P28481 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Col2a1P28481 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Col2a1P28481 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.13□□□□□ -1.75
Col2a1P28481 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col2a1P28481 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col2a1P28481 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col2a1P28481 Mir673-201ENSMUST00000102361 91 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 Gm14776-201ENSMUST00000121029 887 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 Gm12412-201ENSMUST00000121867 328 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 Gm12998-201ENSMUST00000122445 789 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Col2a1P28481 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC4.12□□□□□ -1.75
Col2a1P28481 Gm22034-201ENSMUST00000157283 134 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 Gm23775-201ENSMUST00000158991 249 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col2a1P28481 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC4.12□□□□□ -1.75
Col2a1P28481 Mir6914-201ENSMUST00000184999 69 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 Gm7142-201ENSMUST00000194232 586 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4.12□□□□□ -1.75
Col2a1P28481 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Col2a1P28481 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Col2a1P28481 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.12□□□□□ -1.75
Col2a1P28481 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC4.12□□□□□ -1.75
Col2a1P28481 AC159885.1-201ENSMUST00000222221 199 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col2a1P28481 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col2a1P28481 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.12□□□□□ -1.75
Col2a1P28481 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col2a1P28481 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col2a1P28481 AC153729.4-201ENSMUST00000217582 3826 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Col2a1P28481 Gm9314-201ENSMUST00000199881 1528 ntBASIC4.12□□□□□ -1.75
Col2a1P28481 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col2a1P28481 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
Col2a1P28481 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm5762-201ENSMUST00000119204 258 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm17060-201ENSMUST00000172394 824 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col2a1P28481 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm32381-201ENSMUST00000203192 476 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC4.11□□□□□ -1.75
Col2a1P28481 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col2a1P28481 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC4.11□□□□□ -1.75
Col2a1P28481 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm2710-201ENSMUST00000073196 603 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col2a1P28481 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col2a1P28481 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.11□□□□□ -1.75
Col2a1P28481 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col2a1P28481 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
Col2a1P28481 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
Col2a1P28481 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Col2a1P28481 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC4.11□□□□□ -1.75
Col2a1P28481 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.11□□□□□ -1.75
Col2a1P28481 Gm26145-201ENSMUST00000104476 127 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm23532-201ENSMUST00000104569 112 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col2a1P28481 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC4.11□□□□□ -1.75
Col2a1P28481 Gm12722-201ENSMUST00000118507 493 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm14875-201ENSMUST00000120881 319 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm14126-201ENSMUST00000122345 395 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm25519-201ENSMUST00000158392 127 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col2a1P28481 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Col2a1P28481 Gm3454-201ENSMUST00000185571 412 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm5829-201ENSMUST00000191383 351 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Gm34005-201ENSMUST00000215834 282 ntBASIC4.11□□□□□ -1.75
Col2a1P28481 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Col2a1P28481 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms