Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm7897-201ENSMUST00000193981 554 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm3933-201ENSMUST00000195391 439 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm43476-201ENSMUST00000197873 405 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.29□□□□□ -1.88
Sdc1P18828 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Sdc1P18828 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm45874-201ENSMUST00000212423 346 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm9616-201ENSMUST00000221154 781 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC3.29□□□□□ -1.88
Sdc1P18828 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Olfr1124-201ENSMUST00000062494 957 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sdc1P18828 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Sdc1P18828 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sdc1P18828 Olfr654-201ENSMUST00000098173 1155 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sdc1P18828 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Sdc1P18828 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Sdc1P18828 Vmn2r-ps49-201ENSMUST00000173160 3551 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.29□□□□□ -1.88
Sdc1P18828 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Sdc1P18828 Rian-201ENSMUST00000180876 8089 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Sdc1P18828 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sdc1P18828 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Sdc1P18828 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sdc1P18828 Gm12568-201ENSMUST00000117362 624 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm15073-201ENSMUST00000117432 634 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm16383-201ENSMUST00000118122 232 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm13501-201ENSMUST00000118477 979 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm11481-201ENSMUST00000120069 255 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Mup-ps16-201ENSMUST00000120085 596 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm14840-201ENSMUST00000122135 594 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm24592-201ENSMUST00000122505 106 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Sdc1P18828 Gm26153-201ENSMUST00000157433 127 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm29509-201ENSMUST00000185716 321 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm18505-201ENSMUST00000187360 790 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm29159-201ENSMUST00000187969 379 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Sdc1P18828 Gm43054-201ENSMUST00000199495 884 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm18377-201ENSMUST00000215141 607 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm18225-201ENSMUST00000216708 742 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Prl7a1-203ENSMUST00000224852 1283 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 AC140393.2-201ENSMUST00000226894 943 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 AC121542.1-201ENSMUST00000227245 721 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 CT009600.1-201ENSMUST00000228771 337 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC3.28□□□□□ -1.88
Sdc1P18828 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Sdc1P18828 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sdc1P18828 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Sdc1P18828 Gm24950-201ENSMUST00000082768 191 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm23971-201ENSMUST00000083317 191 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm26121-201ENSMUST00000083364 162 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Mir7-2-201ENSMUST00000083675 97 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm23849-201ENSMUST00000083833 191 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm26316-201ENSMUST00000083886 191 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm25187-201ENSMUST00000083906 133 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm25682-201ENSMUST00000083942 164 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 n-R5s13-201ENSMUST00000093707 119 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Sdc1P18828 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Sdc1P18828 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Sdc1P18828 Gm18180-201ENSMUST00000187562 1484 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Vmn1r36-203ENSMUST00000226728 1458 ntBASIC3.28□□□□□ -1.88
Sdc1P18828 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
Sdc1P18828 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Sdc1P18828 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.28□□□□□ -1.89
Sdc1P18828 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Sdc1P18828 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC3.27□□□□□ -1.89
Sdc1P18828 Gm43990-201ENSMUST00000203790 1691 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Sdc1P18828 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Sdc1P18828 Gm23697-201ENSMUST00000103897 110 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm23594-201ENSMUST00000104307 134 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm11923-201ENSMUST00000118135 508 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC3.27□□□□□ -1.89
Sdc1P18828 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC3.27□□□□□ -1.89
Sdc1P18828 Gm24537-201ENSMUST00000157950 102 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm23205-201ENSMUST00000158671 103 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm17155-201ENSMUST00000165969 473 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Sdc1P18828 Gm20401-201ENSMUST00000173717 212 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm27896-201ENSMUST00000175162 317 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm27535-201ENSMUST00000183814 157 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC3.27□□□□□ -1.89
Sdc1P18828 Gm27190-201ENSMUST00000184890 542 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Zfp-ps-201ENSMUST00000185025 478 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm36986-201ENSMUST00000195320 353 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm43601-201ENSMUST00000196294 945 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Gm42454-201ENSMUST00000196805 1181 ntBASIC3.27□□□□□ -1.89
Sdc1P18828 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms