Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm37088-201ENSMUST00000193887 406 ntBASIC3.48□□□□□ -1.85
Cdx1P18111 Gm37290-201ENSMUST00000195775 339 ntBASIC3.48□□□□□ -1.85
Cdx1P18111 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Cdx1P18111 Gm44077-201ENSMUST00000203453 435 ntTSL 2 BASIC3.48□□□□□ -1.85
Cdx1P18111 Gm44816-201ENSMUST00000206666 477 ntBASIC3.48□□□□□ -1.85
Cdx1P18111 AC166902.1-201ENSMUST00000216653 517 ntBASIC3.48□□□□□ -1.85
Cdx1P18111 AC159472.1-201ENSMUST00000218178 463 ntBASIC3.48□□□□□ -1.85
Cdx1P18111 Gm16419-201ENSMUST00000221057 625 ntBASIC3.48□□□□□ -1.85
Cdx1P18111 CT030705.1-201ENSMUST00000223971 533 ntBASIC3.48□□□□□ -1.85
Cdx1P18111 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Cdx1P18111 Gm25739-201ENSMUST00000082886 107 ntBASIC3.48□□□□□ -1.85
Cdx1P18111 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Cdx1P18111 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.48□□□□□ -1.85
Cdx1P18111 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Cdx1P18111 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Cdx1P18111 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.48□□□□□ -1.85
Cdx1P18111 AC116557.1-201ENSMUST00000219494 1521 ntBASIC3.48□□□□□ -1.85
Cdx1P18111 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Cdx1P18111 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.48□□□□□ -1.85
Cdx1P18111 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
Cdx1P18111 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Cdx1P18111 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Cdx1P18111 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Cdx1P18111 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Cdx1P18111 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC3.47□□□□□ -1.85
Cdx1P18111 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Cdx1P18111 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Gm14577-201ENSMUST00000121134 256 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Gm25427-201ENSMUST00000157605 103 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Gm23023-201ENSMUST00000158767 109 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Mir6715-201ENSMUST00000184990 57 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Gm27538-201ENSMUST00000185065 294 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.47□□□□□ -1.85
Cdx1P18111 Gm37878-201ENSMUST00000192108 387 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Gm38098-201ENSMUST00000194115 241 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.47□□□□□ -1.85
Cdx1P18111 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Gm37836-201ENSMUST00000195875 175 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Gm43476-201ENSMUST00000197873 405 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC3.47□□□□□ -1.85
Cdx1P18111 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC3.47□□□□□ -1.85
Cdx1P18111 Gm5322-201ENSMUST00000206142 699 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Gm8423-201ENSMUST00000211387 607 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 AC174082.1-201ENSMUST00000221106 307 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 AC151730.2-201ENSMUST00000224027 475 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Cdx1P18111 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Cdx1P18111 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Cdx1P18111 Gm42704-201ENSMUST00000196875 1778 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Gm6215-201ENSMUST00000119297 1386 ntBASIC3.47□□□□□ -1.85
Cdx1P18111 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Cdx1P18111 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Cdx1P18111 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Cdx1P18111 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.46□□□□□ -1.85
Cdx1P18111 Gm38057-201ENSMUST00000195551 3203 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Cdx1P18111 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cdx1P18111 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Cdx1P18111 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Snord66-201ENSMUST00000104051 75 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm25726-201ENSMUST00000104529 129 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm14142-201ENSMUST00000117833 296 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm14688-201ENSMUST00000119169 303 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm12587-201ENSMUST00000120180 427 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm12001-201ENSMUST00000121727 913 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm9003-201ENSMUST00000121810 482 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Cdx1P18111 Gm22819-201ENSMUST00000157445 303 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm25898-201ENSMUST00000158303 106 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC3.46□□□□□ -1.86
Cdx1P18111 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.46□□□□□ -1.86
Cdx1P18111 Gm21045-201ENSMUST00000183058 1020 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm27834-201ENSMUST00000183427 125 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm27611-201ENSMUST00000184690 108 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Mir6933-201ENSMUST00000184982 81 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm37857-201ENSMUST00000191784 1199 ntBASIC3.46□□□□□ -1.86
Cdx1P18111 Gm18984-201ENSMUST00000193998 1124 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms