Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm23030-201ENSMUST00000158004 273 ntBASIC5.91□□□□□ -1.46
RaraP11416 Gm24857-201ENSMUST00000158061 310 ntBASIC5.91□□□□□ -1.46
RaraP11416 Gm8816-201ENSMUST00000182280 1163 ntBASIC5.91□□□□□ -1.46
RaraP11416 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RaraP11416 Gm28951-201ENSMUST00000190742 313 ntBASIC5.91□□□□□ -1.46
RaraP11416 Gm18403-201ENSMUST00000192907 529 ntBASIC5.91□□□□□ -1.46
RaraP11416 Gm43522-202ENSMUST00000200185 442 ntTSL 3 BASIC5.91□□□□□ -1.46
RaraP11416 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
RaraP11416 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.91□□□□□ -1.46
RaraP11416 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC5.91□□□□□ -1.46
RaraP11416 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.91□□□□□ -1.46
RaraP11416 Gm10988-201ENSMUST00000209150 1088 ntBASIC5.91□□□□□ -1.46
RaraP11416 AC102287.1-201ENSMUST00000211412 454 ntBASIC5.91□□□□□ -1.46
RaraP11416 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC5.91□□□□□ -1.46
RaraP11416 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
RaraP11416 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.91□□□□□ -1.46
RaraP11416 Gm31849-201ENSMUST00000220306 375 ntBASIC5.91□□□□□ -1.46
RaraP11416 AC166341.3-201ENSMUST00000221861 114 ntBASIC5.91□□□□□ -1.46
RaraP11416 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
RaraP11416 AC131029.2-202ENSMUST00000228430 496 ntBASIC5.91□□□□□ -1.46
RaraP11416 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RaraP11416 Olfr881-201ENSMUST00000074611 948 ntBASIC5.91□□□□□ -1.46
RaraP11416 Mir375-201ENSMUST00000083682 64 ntBASIC5.91□□□□□ -1.46
RaraP11416 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.91□□□□□ -1.46
RaraP11416 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC5.91□□□□□ -1.46
RaraP11416 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
RaraP11416 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RaraP11416 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
RaraP11416 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.91□□□□□ -1.46
RaraP11416 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RaraP11416 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
RaraP11416 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.9□□□□□ -1.46
RaraP11416 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RaraP11416 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RaraP11416 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RaraP11416 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RaraP11416 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
RaraP11416 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RaraP11416 Gm42680-201ENSMUST00000196238 2500 ntBASIC5.9□□□□□ -1.46
RaraP11416 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
RaraP11416 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.9□□□□□ -1.46
RaraP11416 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RaraP11416 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RaraP11416 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RaraP11416 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RaraP11416 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.9□□□□□ -1.46
RaraP11416 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
RaraP11416 Gm9700-201ENSMUST00000193786 1617 ntBASIC5.9□□□□□ -1.46
RaraP11416 Gm45160-201ENSMUST00000207112 3099 ntBASIC5.9□□□□□ -1.46
RaraP11416 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RaraP11416 Gm15044-201ENSMUST00000120703 598 ntBASIC5.9□□□□□ -1.46
RaraP11416 Gm14972-201ENSMUST00000121780 364 ntBASIC5.9□□□□□ -1.46
RaraP11416 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5.9□□□□□ -1.46
RaraP11416 Gm15075-201ENSMUST00000122187 477 ntBASIC5.9□□□□□ -1.46
RaraP11416 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC5.9□□□□□ -1.46
RaraP11416 Gm23774-201ENSMUST00000158990 131 ntBASIC5.9□□□□□ -1.46
RaraP11416 Gm10087-201ENSMUST00000167650 330 ntBASIC5.9□□□□□ -1.46
RaraP11416 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC5.9□□□□□ -1.46
RaraP11416 Mir6401-201ENSMUST00000184499 109 ntBASIC5.9□□□□□ -1.46
RaraP11416 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RaraP11416 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.9□□□□□ -1.46
RaraP11416 Mir3970-201ENSMUST00000199287 90 ntBASIC5.9□□□□□ -1.46
RaraP11416 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC5.9□□□□□ -1.46
RaraP11416 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.9□□□□□ -1.46
RaraP11416 Gm10709-201ENSMUST00000213318 480 ntBASIC5.9□□□□□ -1.46
RaraP11416 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
RaraP11416 Gm18488-201ENSMUST00000215082 364 ntBASIC5.9□□□□□ -1.46
RaraP11416 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC5.9□□□□□ -1.46
RaraP11416 CT030187.1-201ENSMUST00000220605 252 ntBASIC5.9□□□□□ -1.46
RaraP11416 AC122924.2-201ENSMUST00000220799 298 ntBASIC5.9□□□□□ -1.46
RaraP11416 Gm20102-201ENSMUST00000222445 220 ntBASIC5.9□□□□□ -1.46
RaraP11416 AC154224.1-201ENSMUST00000224367 403 ntBASIC5.9□□□□□ -1.46
RaraP11416 Olfr1052-203ENSMUST00000217166 1694 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RaraP11416 Olfr911-ps1-202ENSMUST00000216496 3576 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RaraP11416 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.9□□□□□ -1.47
RaraP11416 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
RaraP11416 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RaraP11416 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC5.9□□□□□ -1.47
RaraP11416 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RaraP11416 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RaraP11416 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
RaraP11416 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RaraP11416 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
RaraP11416 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
RaraP11416 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
RaraP11416 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RaraP11416 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.89□□□□□ -1.47
RaraP11416 AC116557.1-201ENSMUST00000219494 1521 ntBASIC5.89□□□□□ -1.47
RaraP11416 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.89□□□□□ -1.47
RaraP11416 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.89□□□□□ -1.47
RaraP11416 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RaraP11416 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.89□□□□□ -1.47
RaraP11416 AC121844.2-201ENSMUST00000219067 2066 ntBASIC5.89□□□□□ -1.47
RaraP11416 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RaraP11416 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RaraP11416 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms