Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC107864.1-201ENSMUST00000217937 496 ntBASIC4.23□□□□□ -1.73
Col1a1P11087 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.23□□□□□ -1.73
Col1a1P11087 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Col1a1P11087 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Col1a1P11087 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Col1a1P11087 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
Col1a1P11087 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col1a1P11087 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col1a1P11087 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col1a1P11087 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col1a1P11087 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.22□□□□□ -1.73
Col1a1P11087 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.22□□□□□ -1.73
Col1a1P11087 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col1a1P11087 Gm15231-201ENSMUST00000119174 447 ntBASIC4.22□□□□□ -1.73
Col1a1P11087 Gm5762-201ENSMUST00000119204 258 ntBASIC4.22□□□□□ -1.73
Col1a1P11087 Gm12005-201ENSMUST00000121451 379 ntBASIC4.22□□□□□ -1.73
Col1a1P11087 Gm13459-201ENSMUST00000121558 646 ntBASIC4.22□□□□□ -1.73
Col1a1P11087 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col1a1P11087 Gm2617-201ENSMUST00000185690 1066 ntBASIC4.22□□□□□ -1.73
Col1a1P11087 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.22□□□□□ -1.73
Col1a1P11087 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col1a1P11087 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC4.22□□□□□ -1.73
Col1a1P11087 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col1a1P11087 BC023105-201ENSMUST00000073997 1227 ntBASIC4.22□□□□□ -1.73
Col1a1P11087 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Col1a1P11087 Gm22154-201ENSMUST00000083844 131 ntBASIC4.22□□□□□ -1.73
Col1a1P11087 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC4.22□□□□□ -1.73
Col1a1P11087 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Col1a1P11087 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col1a1P11087 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
Col1a1P11087 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.22□□□□□ -1.73
Col1a1P11087 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Col1a1P11087 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Col1a1P11087 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.21□□□□□ -1.74
Col1a1P11087 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Col1a1P11087 Gm25539-201ENSMUST00000116886 122 ntBASIC4.21□□□□□ -1.74
Col1a1P11087 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.21□□□□□ -1.74
Col1a1P11087 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.21□□□□□ -1.74
Col1a1P11087 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.21□□□□□ -1.74
Col1a1P11087 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Col1a1P11087 Gm6265-201ENSMUST00000149263 231 ntBASIC4.21□□□□□ -1.74
Col1a1P11087 Gm26088-201ENSMUST00000157896 131 ntBASIC4.21□□□□□ -1.74
Col1a1P11087 Gm23028-201ENSMUST00000158773 265 ntBASIC4.21□□□□□ -1.74
Col1a1P11087 Gm22011-201ENSMUST00000158790 123 ntBASIC4.21□□□□□ -1.74
Col1a1P11087 Gm27374-201ENSMUST00000183660 81 ntBASIC4.21□□□□□ -1.74
Col1a1P11087 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.21□□□□□ -1.74
Col1a1P11087 Gm45498-201ENSMUST00000210346 283 ntBASIC4.21□□□□□ -1.74
Col1a1P11087 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
Col1a1P11087 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col1a1P11087 Taar4-201ENSMUST00000092660 1044 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col1a1P11087 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Col1a1P11087 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Col1a1P11087 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC4.21□□□□□ -1.74
Col1a1P11087 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
Col1a1P11087 Gm37064-201ENSMUST00000193851 2231 ntBASIC4.21□□□□□ -1.74
Col1a1P11087 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.21□□□□□ -1.74
Col1a1P11087 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Col1a1P11087 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Col1a1P11087 Gm14240-201ENSMUST00000120353 546 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Gm7308-201ENSMUST00000121087 447 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Gm23775-201ENSMUST00000158991 249 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Gm16300-201ENSMUST00000160031 1279 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.2□□□□□ -1.74
Col1a1P11087 Mir6917-201ENSMUST00000184111 61 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Mir7081-201ENSMUST00000184490 75 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Gm29045-201ENSMUST00000187278 698 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Gm6445-201ENSMUST00000189515 1112 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col1a1P11087 Gm37085-201ENSMUST00000193780 196 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC4.2□□□□□ -1.74
Col1a1P11087 Gm44712-201ENSMUST00000206250 1076 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col1a1P11087 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Col1a1P11087 Gm6991-201ENSMUST00000218475 1178 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Gm9370-201ENSMUST00000222787 609 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Col1a1P11087 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.2□□□□□ -1.74
Col1a1P11087 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
Col1a1P11087 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Col1a1P11087 Gm6300-201ENSMUST00000192393 1498 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Gm43923-201ENSMUST00000203992 2911 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
Col1a1P11087 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col1a1P11087 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Col1a1P11087 Gm37504-201ENSMUST00000192537 2374 ntBASIC4.2□□□□□ -1.74
Col1a1P11087 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
Col1a1P11087 Gm14811-201ENSMUST00000117070 117 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Gm13924-201ENSMUST00000119899 486 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Gm11448-201ENSMUST00000120427 450 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Vmn1r-ps132-201ENSMUST00000120434 892 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Gm5368-201ENSMUST00000189012 589 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Gm37701-201ENSMUST00000192947 1100 ntBASIC4.19□□□□□ -1.74
Col1a1P11087 Gm9931-201ENSMUST00000193584 1185 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms