Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
Hoxd3P09027 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 AC163731.1-201ENSMUST00000225696 3118 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm37423-201ENSMUST00000194246 3342 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Hoxd3P09027 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Cd274-201ENSMUST00000016640 3622 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Snora35-201ENSMUST00000104579 128 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm24605-201ENSMUST00000104772 96 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm13664-201ENSMUST00000117304 345 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm13469-201ENSMUST00000118231 350 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm13755-201ENSMUST00000118509 305 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm12956-201ENSMUST00000122184 414 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm15300-201ENSMUST00000122324 279 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm17072-201ENSMUST00000166673 658 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Mir5107-201ENSMUST00000175586 88 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm43033-201ENSMUST00000199682 425 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC4.92□□□□□ -1.62
Hoxd3P09027 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm45815-201ENSMUST00000220241 146 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Mir342-201ENSMUST00000083502 99 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 n-R5s89-201ENSMUST00000083532 104 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 n-R5s58-201ENSMUST00000093682 119 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm44229-201ENSMUST00000203211 2487 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 AC114585.1-201ENSMUST00000228080 3680 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm43496-201ENSMUST00000201682 3001 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm7048-201ENSMUST00000199395 1891 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm43663-201ENSMUST00000198643 1505 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Uevld-201ENSMUST00000094398 4616 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Hoxd3P09027 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Hoxd3P09027 Gm37642-201ENSMUST00000193166 1735 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC4.92□□□□□ -1.62
Hoxd3P09027 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm37183-201ENSMUST00000191712 3405 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm43719-201ENSMUST00000200088 2199 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Lhfpl3-201ENSMUST00000196406 2589 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Errfi1-202ENSMUST00000073600 3036 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm14825-201ENSMUST00000113538 701 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm15951-201ENSMUST00000118377 400 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm13772-201ENSMUST00000118431 317 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm15112-201ENSMUST00000120152 860 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm13967-201ENSMUST00000120404 380 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm12107-201ENSMUST00000132857 889 ntTSL 5 BASIC4.91□□□□□ -1.62
Hoxd3P09027 AI646519-201ENSMUST00000140987 351 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm25555-201ENSMUST00000158078 111 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm24675-201ENSMUST00000158757 259 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 Mir6336-201ENSMUST00000183581 130 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 Gm27540-201ENSMUST00000184950 187 ntBASIC4.91□□□□□ -1.62
Hoxd3P09027 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Hoxd3P09027 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms