Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm38098-201ENSMUST00000194115 241 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC4.7□□□□□ -1.66
Col3a1P08121 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Gm45659-201ENSMUST00000209295 564 ntTSL 2 BASIC4.7□□□□□ -1.66
Col3a1P08121 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col3a1P08121 Gm7119-201ENSMUST00000221345 695 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col3a1P08121 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Col3a1P08121 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC4.7□□□□□ -1.66
Col3a1P08121 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Col3a1P08121 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col3a1P08121 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.7□□□□□ -1.66
Col3a1P08121 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col3a1P08121 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col3a1P08121 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Col3a1P08121 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Col3a1P08121 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col3a1P08121 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Col3a1P08121 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Col3a1P08121 2310057J18Rik-202ENSMUST00000140558 1445 ntTSL 5 BASIC4.69□□□□□ -1.66
Col3a1P08121 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm25168-201ENSMUST00000104189 132 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm13664-201ENSMUST00000117304 345 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC4.69□□□□□ -1.66
Col3a1P08121 Gm25977-201ENSMUST00000158697 85 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col3a1P08121 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Col3a1P08121 Gm17164-201ENSMUST00000169013 506 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col3a1P08121 Gm18358-201ENSMUST00000173179 1277 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC4.69□□□□□ -1.66
Col3a1P08121 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.69□□□□□ -1.66
Col3a1P08121 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC4.69□□□□□ -1.66
Col3a1P08121 Trbv28-201ENSMUST00000192804 264 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm42438-201ENSMUST00000197832 974 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC4.69□□□□□ -1.66
Col3a1P08121 AC159242.1-201ENSMUST00000225832 194 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col3a1P08121 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col3a1P08121 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col3a1P08121 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.69□□□□□ -1.66
Col3a1P08121 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col3a1P08121 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Col3a1P08121 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Col3a1P08121 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col3a1P08121 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col3a1P08121 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col3a1P08121 Gm15780-201ENSMUST00000121283 935 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm11389-201ENSMUST00000121407 430 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm11200-201ENSMUST00000121698 448 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm16363-201ENSMUST00000132460 877 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm26276-201ENSMUST00000157099 109 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm22320-201ENSMUST00000157149 312 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col3a1P08121 Gm5368-201ENSMUST00000189012 589 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.69□□□□□ -1.66
Col3a1P08121 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col3a1P08121 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC4.69□□□□□ -1.66
Col3a1P08121 Gm44690-201ENSMUST00000207984 382 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm44688-201ENSMUST00000209083 537 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm4928-201ENSMUST00000219622 850 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.69□□□□□ -1.66
Col3a1P08121 AC156952.1-201ENSMUST00000220361 793 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Col3a1P08121 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Col3a1P08121 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Col3a1P08121 Gm24035-201ENSMUST00000082867 107 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Gm10780-201ENSMUST00000099459 285 ntBASIC4.69□□□□□ -1.66
Col3a1P08121 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col3a1P08121 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col3a1P08121 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Col3a1P08121 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col3a1P08121 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
Col3a1P08121 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col3a1P08121 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col3a1P08121 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Col3a1P08121 Gm10241-201ENSMUST00000117664 286 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 Gm13690-201ENSMUST00000118989 285 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 Mup-ps20-201ENSMUST00000121132 389 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 Gm13676-201ENSMUST00000122185 591 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC4.68□□□□□ -1.66
Col3a1P08121 Gm22380-201ENSMUST00000157479 95 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 Gm18416-201ENSMUST00000175635 1003 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Col3a1P08121 Esp38-201ENSMUST00000178880 243 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Col3a1P08121 Gm27392-201ENSMUST00000185041 101 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Col3a1P08121 Gm29359-201ENSMUST00000191007 495 ntTSL 5 BASIC4.68□□□□□ -1.66
Col3a1P08121 Gm37727-201ENSMUST00000191637 819 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 Gm37239-201ENSMUST00000193510 141 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC4.68□□□□□ -1.66
Col3a1P08121 Gm43992-201ENSMUST00000204358 197 ntBASIC4.68□□□□□ -1.66
Col3a1P08121 Gm44611-201ENSMUST00000207507 355 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms