Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Mir6401-201ENSMUST00000184499 109 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm27679-201ENSMUST00000184612 84 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm37492-201ENSMUST00000191948 376 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm45023-201ENSMUST00000207951 379 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm45590-201ENSMUST00000209715 262 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 AC159380.1-201ENSMUST00000218096 121 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm18696-201ENSMUST00000220103 274 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Olfr832-201ENSMUST00000060601 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm22126-201ENSMUST00000083244 142 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm16261-201ENSMUST00000096813 205 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Olfr657-201ENSMUST00000098171 960 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm43027-201ENSMUST00000202906 3691 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm38388-201ENSMUST00000195569 1430 ntBASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Pcdh1F7BJK1 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm24235-201ENSMUST00000104319 129 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm21637-201ENSMUST00000105124 778 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm16431-201ENSMUST00000117454 431 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm14897-201ENSMUST00000118213 207 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm11902-201ENSMUST00000118849 270 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm14805-201ENSMUST00000120172 340 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm2005-201ENSMUST00000120759 542 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm13259-201ENSMUST00000120792 456 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm11829-201ENSMUST00000121003 282 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm6591-201ENSMUST00000121063 434 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm14237-201ENSMUST00000122080 430 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm22479-201ENSMUST00000122566 81 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm23068-201ENSMUST00000158239 293 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm9597-201ENSMUST00000171913 602 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm17907-201ENSMUST00000173150 710 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm14527-201ENSMUST00000179300 639 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm27653-201ENSMUST00000185037 136 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm9569-201ENSMUST00000187492 787 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm2077-201ENSMUST00000195017 319 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm2926-201ENSMUST00000205625 239 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm45375-201ENSMUST00000210338 280 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm45750-201ENSMUST00000211966 354 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 AC166358.10-201ENSMUST00000220556 144 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 AC154506.1-201ENSMUST00000225178 621 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 CT025689.4-201ENSMUST00000225926 601 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 AC120375.2-202ENSMUST00000228722 397 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 AC126690.1-201ENSMUST00000228898 397 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm22572-201ENSMUST00000082985 105 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Gm22365-201ENSMUST00000093750 117 ntBASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Vmn1r209-202ENSMUST00000227038 6461 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Pcdh1F7BJK1 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms