Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC4.36□□□□□ -1.71
H2afb3S4R1G7 Amy1-201ENSMUST00000067980 1985 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
H2afb3S4R1G7 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.36□□□□□ -1.71
H2afb3S4R1G7 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
H2afb3S4R1G7 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
H2afb3S4R1G7 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.36□□□□□ -1.71
H2afb3S4R1G7 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.36□□□□□ -1.71
H2afb3S4R1G7 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.36□□□□□ -1.71
H2afb3S4R1G7 Svet1-201ENSMUST00000209370 3940 ntBASIC4.36□□□□□ -1.71
H2afb3S4R1G7 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC4.36□□□□□ -1.71
H2afb3S4R1G7 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
H2afb3S4R1G7 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.36□□□□□ -1.71
H2afb3S4R1G7 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm18853-201ENSMUST00000183629 3596 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm42729-201ENSMUST00000201770 2930 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Traj16-201ENSMUST00000103725 61 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm13728-201ENSMUST00000117471 400 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm11869-201ENSMUST00000118701 329 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm7421-201ENSMUST00000119298 639 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm11481-201ENSMUST00000120069 255 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm14725-201ENSMUST00000120324 828 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm13339-201ENSMUST00000120651 510 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm7365-201ENSMUST00000120877 639 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm13743-201ENSMUST00000121486 724 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm25293-201ENSMUST00000122792 285 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm22261-201ENSMUST00000158691 324 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm28343-201ENSMUST00000185386 112 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm8929-201ENSMUST00000197781 1132 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm42896-201ENSMUST00000201249 1113 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm32536-201ENSMUST00000205209 445 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm45026-201ENSMUST00000205292 833 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm45192-201ENSMUST00000206749 283 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm44961-201ENSMUST00000207450 196 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm21112-201ENSMUST00000212224 578 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm7760-201ENSMUST00000212265 578 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm7807-201ENSMUST00000212475 578 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm18774-201ENSMUST00000218269 601 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 AL590614.1-201ENSMUST00000226037 268 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Olfr741-201ENSMUST00000071932 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Mir338-201ENSMUST00000083666 98 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
H2afb3S4R1G7 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm22273-201ENSMUST00000104040 132 ntBASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm25419-201ENSMUST00000104215 191 ntBASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm11196-201ENSMUST00000119052 395 ntBASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm13488-201ENSMUST00000120419 179 ntBASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm16179-201ENSMUST00000120685 373 ntBASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm14651-201ENSMUST00000147192 442 ntBASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm24724-201ENSMUST00000158230 107 ntBASIC4.34□□□□□ -1.71
H2afb3S4R1G7 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm17081-201ENSMUST00000167363 478 ntBASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm17060-201ENSMUST00000172394 824 ntBASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC4.34□□□□□ -1.71
H2afb3S4R1G7 Gm27428-201ENSMUST00000184289 110 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms