Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Gm45590-201ENSMUST00000209715 262 ntBASIC5.3□□□□□ -1.56
Ssu72Q9CY97 LOC665443-201ENSMUST00000212284 796 ntBASIC5.3□□□□□ -1.56
Ssu72Q9CY97 AC153954.2-201ENSMUST00000213811 287 ntBASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Gm18120-201ENSMUST00000220079 511 ntBASIC5.3□□□□□ -1.56
Ssu72Q9CY97 AC154506.1-201ENSMUST00000225178 621 ntBASIC5.3□□□□□ -1.56
Ssu72Q9CY97 AC117588.2-201ENSMUST00000228340 311 ntBASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Gm22456-201ENSMUST00000082578 125 ntBASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Vaultrc5-201ENSMUST00000083211 143 ntBASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Mir20a-201ENSMUST00000083508 107 ntBASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Snord38a-201ENSMUST00000083746 71 ntBASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Gm18432-201ENSMUST00000195568 1451 ntBASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 AC124586.1-201ENSMUST00000221673 2795 ntBASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Ssu72Q9CY97 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm20667-201ENSMUST00000175674 1930 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm5925-201ENSMUST00000105016 1497 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 AC151831.1-201ENSMUST00000227609 4033 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm14529-201ENSMUST00000117894 406 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm12820-201ENSMUST00000119233 342 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm13669-201ENSMUST00000122366 457 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm16330-201ENSMUST00000128324 297 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm25989-201ENSMUST00000158761 133 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm22411-201ENSMUST00000175462 126 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm22002-201ENSMUST00000175622 125 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm22307-201ENSMUST00000180019 107 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm28008-201ENSMUST00000184021 186 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm27660-201ENSMUST00000184028 208 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm29064-201ENSMUST00000187014 813 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm37743-201ENSMUST00000194645 376 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm37445-201ENSMUST00000195318 242 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm8747-201ENSMUST00000195392 751 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm43078-201ENSMUST00000197222 168 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm42663-201ENSMUST00000199883 351 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm7838-201ENSMUST00000203221 1189 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm44312-201ENSMUST00000203536 469 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 AC153537.1-201ENSMUST00000215530 858 ntTSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm23627-201ENSMUST00000082459 107 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm22502-201ENSMUST00000082488 107 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm24149-201ENSMUST00000082757 107 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm23939-201ENSMUST00000082880 133 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm23460-201ENSMUST00000083258 109 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm25008-201ENSMUST00000083809 81 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm22365-201ENSMUST00000093750 117 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Cyp4a31-202ENSMUST00000030486 2509 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Ssu72Q9CY97 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms