Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm26329-201ENSMUST00000093723 110 ntBASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 AC126439.1-201ENSMUST00000226772 2104 ntBASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Tbx22-204ENSMUST00000168403 1715 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Pcdhb3Q91XZ7 Gm45493-201ENSMUST00000209494 3948 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm12939-201ENSMUST00000117303 165 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm12573-201ENSMUST00000118158 286 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm15149-201ENSMUST00000119370 360 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm14070-201ENSMUST00000120773 428 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm22990-201ENSMUST00000175427 89 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm26622-201ENSMUST00000180520 298 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm27585-201ENSMUST00000183717 199 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm29350-201ENSMUST00000189141 541 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm18384-201ENSMUST00000195974 808 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm6059-201ENSMUST00000196903 340 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm42458-201ENSMUST00000201914 369 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm45207-201ENSMUST00000207469 145 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 AC165349.1-201ENSMUST00000217896 424 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm24621-201ENSMUST00000082679 140 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Kif27-201ENSMUST00000043605 4462 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 AC108802.1-201ENSMUST00000219501 3142 ntBASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Pcdhb3Q91XZ7 Gm38096-201ENSMUST00000193692 2389 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Olfr391-ps-201ENSMUST00000214485 2080 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm15844-201ENSMUST00000118016 576 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm13265-201ENSMUST00000118090 421 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm15951-201ENSMUST00000118377 400 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm22235-201ENSMUST00000157085 110 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm25387-201ENSMUST00000157813 132 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm16353-201ENSMUST00000159458 1223 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm17511-201ENSMUST00000172206 342 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm27210-201ENSMUST00000184263 402 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm28163-201ENSMUST00000187099 325 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm43089-201ENSMUST00000199162 275 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm35931-201ENSMUST00000203931 448 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm44795-201ENSMUST00000205496 319 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm4587-201ENSMUST00000209135 637 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 AC158633.1-201ENSMUST00000219892 649 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 AC129202.3-201ENSMUST00000224413 733 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Pcdhb3Q91XZ7 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms