Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.23□□□□□ -1.89
Col6a6Q8C6K9 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm23530-201ENSMUST00000104564 137 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm15166-201ENSMUST00000120790 385 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm15466-201ENSMUST00000122299 333 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm15367-201ENSMUST00000122398 1016 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm29334-201ENSMUST00000190334 357 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm7443-201ENSMUST00000206355 378 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm18228-201ENSMUST00000217297 1091 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm37747-201ENSMUST00000193717 4003 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm26476-201ENSMUST00000122618 313 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm26100-201ENSMUST00000157245 127 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm21617-201ENSMUST00000188297 691 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Gm19596-201ENSMUST00000203685 739 ntBASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col6a6Q8C6K9 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.89
Col6a6Q8C6K9 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC3.21□□□□□ -1.89
Col6a6Q8C6K9 Gm38264-201ENSMUST00000194850 2032 ntBASIC3.21□□□□□ -1.89
Col6a6Q8C6K9 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
Col6a6Q8C6K9 AC153729.4-201ENSMUST00000217582 3826 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm7308-201ENSMUST00000121087 447 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm12005-201ENSMUST00000121451 379 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm22034-201ENSMUST00000157283 134 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm17953-201ENSMUST00000192061 667 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm37575-201ENSMUST00000195467 309 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm6510-201ENSMUST00000195916 574 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm5983-201ENSMUST00000197739 770 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm42428-201ENSMUST00000198677 302 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm18194-201ENSMUST00000210455 481 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 AC153954.2-201ENSMUST00000213811 287 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm46233-201ENSMUST00000217831 449 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm2987-201ENSMUST00000187673 1693 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm14714-201ENSMUST00000119743 439 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm5058-201ENSMUST00000187331 463 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm37741-201ENSMUST00000191768 1256 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm37698-201ENSMUST00000192605 463 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Gm45409-201ENSMUST00000211486 252 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Olfr1153-201ENSMUST00000052300 957 ntBASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Olfr209-201ENSMUST00000055868 918 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Col6a6Q8C6K9 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Gm37195-201ENSMUST00000192006 3018 ntBASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Gm8475-201ENSMUST00000118211 526 ntBASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Gm13873-201ENSMUST00000119208 427 ntBASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Gm13557-201ENSMUST00000120771 382 ntBASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Gm12998-201ENSMUST00000122445 789 ntBASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Gm23773-201ENSMUST00000158985 296 ntBASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Gm27308-201ENSMUST00000184807 233 ntBASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 AC134439.2-201ENSMUST00000221950 467 ntBASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Csn1s2b-201ENSMUST00000072539 810 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.2□□□□□ -1.9
Col6a6Q8C6K9 Gm13803-201ENSMUST00000117547 489 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm6762-201ENSMUST00000121769 289 ntBASIC3.19□□□□□ -1.9
Col6a6Q8C6K9 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms