Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm44567-201ENSMUST00000205645 2631 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm9429-201ENSMUST00000117804 868 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm26372-201ENSMUST00000157831 236 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm25048-201ENSMUST00000158598 91 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm20657-201ENSMUST00000177079 515 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm22716-201ENSMUST00000177596 107 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm27928-201ENSMUST00000183747 256 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm27165-201ENSMUST00000183951 232 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm36999-201ENSMUST00000192756 1046 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm34068-201ENSMUST00000193310 632 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Igkv2-107-201ENSMUST00000196000 313 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Mir219c-201ENSMUST00000199860 60 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm44765-201ENSMUST00000206927 601 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm5735-201ENSMUST00000207053 167 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm7786-201ENSMUST00000210494 436 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 LOC665443-201ENSMUST00000212284 796 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm11360-201ENSMUST00000221898 262 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 AC158525.1-201ENSMUST00000223806 576 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 CT030705.1-201ENSMUST00000223971 533 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 AC155237.2-201ENSMUST00000228487 478 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Cox7b-201ENSMUST00000033582 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 n-R5s204-201ENSMUST00000082972 119 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm23459-201ENSMUST00000083259 131 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 4921518K17Rik-201ENSMUST00000143949 3390 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm42598-201ENSMUST00000200110 2437 ntBASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Trim47Q8C0E3 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm26078-201ENSMUST00000104067 128 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm22592-201ENSMUST00000104242 131 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm26146-201ENSMUST00000104478 185 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm15073-201ENSMUST00000117432 634 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm10241-201ENSMUST00000117664 286 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm13991-201ENSMUST00000120190 648 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm24504-201ENSMUST00000157679 100 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm24692-201ENSMUST00000157761 146 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Vmn1r-ps25-201ENSMUST00000173545 799 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm4761-201ENSMUST00000178086 582 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm29736-201ENSMUST00000198189 385 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm43456-201ENSMUST00000202519 457 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm17737-201ENSMUST00000210183 1147 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm4032-201ENSMUST00000210886 487 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm45616-201ENSMUST00000211711 319 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 AC123705.4-203ENSMUST00000221566 380 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 CT030166.2-201ENSMUST00000222021 368 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 CT030184.1-201ENSMUST00000222393 416 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 AC134468.2-201ENSMUST00000222549 672 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 AC173482.5-201ENSMUST00000224181 327 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 AC109172.1-201ENSMUST00000227503 187 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 AC131029.2-202ENSMUST00000228430 496 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm22508-201ENSMUST00000082772 110 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Snord47-201ENSMUST00000083034 77 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Mir331-201ENSMUST00000083673 96 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Gm45838-201ENSMUST00000207355 2447 ntBASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim47Q8C0E3 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim47Q8C0E3 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms