Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm22038-201ENSMUST00000157277 242 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm29490-201ENSMUST00000190923 342 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm43717-201ENSMUST00000198684 310 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm2011-203ENSMUST00000203750 435 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm44149-201ENSMUST00000204256 226 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm44184-201ENSMUST00000204290 132 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 AC152979.3-201ENSMUST00000217720 479 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 AC155929.1-201ENSMUST00000220217 1276 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 AC192616.2-201ENSMUST00000221482 3841 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 Selenok-ps8-201ENSMUST00000221926 280 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm37661-201ENSMUST00000191863 1550 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 AC164102.1-201ENSMUST00000220524 1553 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 AC153144.1-201ENSMUST00000221759 3139 ntBASIC6.08□□□□□ -1.44
Trim56Q80VI1 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Trim56Q80VI1 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Trim56Q80VI1 AC140299.2-201ENSMUST00000219546 1969 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm43025-201ENSMUST00000201764 1886 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm25111-201ENSMUST00000116686 147 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm11386-201ENSMUST00000117761 347 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm14750-201ENSMUST00000118262 516 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Olfr337-ps1-201ENSMUST00000120380 456 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm13430-201ENSMUST00000121366 288 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm23537-201ENSMUST00000157536 330 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm20773-201ENSMUST00000178940 681 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm4617-201ENSMUST00000178993 331 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm37492-201ENSMUST00000191948 376 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Trim56Q80VI1 2900037B21Rik-201ENSMUST00000194352 337 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm29813-201ENSMUST00000195856 447 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm3442-201ENSMUST00000216808 710 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 AC161114.1-201ENSMUST00000218223 474 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 CT025616.1-201ENSMUST00000221158 412 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 AC121599.1-201ENSMUST00000224276 449 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm4963-201ENSMUST00000072718 378 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Olfr345-201ENSMUST00000076850 936 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Fam107b-209ENSMUST00000226435 3602 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm8675-201ENSMUST00000201408 1856 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.07□□□□□ -1.44
Trim56Q80VI1 Gm31258-201ENSMUST00000194532 3297 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 AC154184.1-201ENSMUST00000224375 1620 ntBASIC6.07□□□□□ -1.44
Trim56Q80VI1 Fat1-205ENSMUST00000191428 14814 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm37485-201ENSMUST00000192326 2953 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm5653-201ENSMUST00000223393 1337 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm43210-201ENSMUST00000196743 6152 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Trim56Q80VI1 AC147639.2-202ENSMUST00000224834 1545 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm25097-201ENSMUST00000104042 145 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm25563-201ENSMUST00000104603 74 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm13311-201ENSMUST00000117863 379 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm7429-201ENSMUST00000118664 348 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm14560-201ENSMUST00000118672 375 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm13503-201ENSMUST00000119017 446 ntBASIC6.06□□□□□ -1.44
Trim56Q80VI1 Gm12935-201ENSMUST00000119352 246 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms