Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Trim28Q62318 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.79□□□□□ -1.48
Trim28Q62318 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Trim28Q62318 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim28Q62318 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim28Q62318 Gm37407-201ENSMUST00000194793 1316 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Gm15110-201ENSMUST00000117545 881 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Gm13550-201ENSMUST00000118185 525 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Gm13080-201ENSMUST00000120556 420 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Olfr336-ps1-201ENSMUST00000120897 940 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Gm22958-201ENSMUST00000122512 184 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim28Q62318 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim28Q62318 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim28Q62318 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Gm27317-201ENSMUST00000183533 95 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Mir3620-201ENSMUST00000184710 61 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Gm18727-201ENSMUST00000185981 553 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim28Q62318 Gm29598-201ENSMUST00000188996 588 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Trim28Q62318 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim28Q62318 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim28Q62318 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.78□□□□□ -1.48
Trim28Q62318 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Trim28Q62318 AC130823.2-201ENSMUST00000226169 290 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Gm7257-201ENSMUST00000041537 519 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim28Q62318 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Trim28Q62318 Mir465-201ENSMUST00000093563 74 ntBASIC5.78□□□□□ -1.48
Trim28Q62318 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.78□□□□□ -1.48
Trim28Q62318 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Trim28Q62318 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim28Q62318 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim28Q62318 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim28Q62318 Gm15076-201ENSMUST00000117076 474 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Gm12889-201ENSMUST00000118684 241 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim28Q62318 Gm23789-201ENSMUST00000122536 301 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC5.77□□□□□ -1.49
Trim28Q62318 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim28Q62318 Gm22836-201ENSMUST00000158441 61 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Gm24636-201ENSMUST00000158673 288 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Gm22668-201ENSMUST00000158716 260 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim28Q62318 Spanxn4-201ENSMUST00000172433 424 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Gm21070-201ENSMUST00000182425 985 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Gm27457-201ENSMUST00000184771 156 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim28Q62318 Gm5372-201ENSMUST00000187540 409 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim28Q62318 Gm28414-201ENSMUST00000190111 294 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Gm18296-201ENSMUST00000192475 783 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC5.77□□□□□ -1.49
Trim28Q62318 Gm29950-201ENSMUST00000195273 237 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Gm44726-201ENSMUST00000203427 217 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Gm44665-201ENSMUST00000205381 251 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC5.77□□□□□ -1.49
Trim28Q62318 Gm18252-203ENSMUST00000215855 757 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 AC153852.1-201ENSMUST00000217881 567 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC5.77□□□□□ -1.49
Trim28Q62318 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 CT030684.2-201ENSMUST00000228946 826 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim28Q62318 Gm25134-201ENSMUST00000082646 160 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Gm25810-201ENSMUST00000082752 108 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
Trim28Q62318 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Trim28Q62318 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim28Q62318 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim28Q62318 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Trim28Q62318 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim28Q62318 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Trim28Q62318 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Trim28Q62318 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim28Q62318 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim28Q62318 Atp1b4-202ENSMUST00000115134 4189 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Trim28Q62318 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.77□□□□□ -1.49
Trim28Q62318 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
Trim28Q62318 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim28Q62318 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Trim28Q62318 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.76□□□□□ -1.49
Trim28Q62318 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim28Q62318 Gm22493-201ENSMUST00000104494 132 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC5.76□□□□□ -1.49
Trim28Q62318 Gm12392-201ENSMUST00000118014 938 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Gm16428-201ENSMUST00000121193 723 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Gm8200-201ENSMUST00000122390 222 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Gm22789-201ENSMUST00000157884 130 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Gm22383-201ENSMUST00000158188 327 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Gm3221-201ENSMUST00000164869 440 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Trim28Q62318 Gm18357-201ENSMUST00000188184 580 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Gm36998-201ENSMUST00000193205 704 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Gm18410-201ENSMUST00000207199 577 ntBASIC5.76□□□□□ -1.49
Trim28Q62318 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms