Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Gm45439-201ENSMUST00000211723 359 ntBASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC10.02□□□□□ -0.81
Trim41Q5NCC3 AC125399.1-201ENSMUST00000224236 595 ntBASIC10.02□□□□□ -0.81
Trim41Q5NCC3 AC131029.2-202ENSMUST00000228430 496 ntBASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Trim41Q5NCC3 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trim41Q5NCC3 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Gm11219-201ENSMUST00000118565 358 ntBASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Gm25362-201ENSMUST00000158854 105 ntBASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Gm8649-201ENSMUST00000181799 233 ntBASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Gm29086-201ENSMUST00000186774 222 ntBASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Gm29085-201ENSMUST00000187108 225 ntBASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Gm43804-201ENSMUST00000198280 456 ntBASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Gm44859-201ENSMUST00000207831 94 ntBASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Gm22350-201ENSMUST00000083924 156 ntBASIC10.01□□□□□ -0.81
Trim41Q5NCC3 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 AC160028.2-201ENSMUST00000218937 2519 ntBASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Piga-202ENSMUST00000112255 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trim41Q5NCC3 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trim41Q5NCC3 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trim41Q5NCC3 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trim41Q5NCC3 Gm43164-201ENSMUST00000202529 2128 ntBASIC10□□□□□ -0.81
Trim41Q5NCC3 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim41Q5NCC3 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC10□□□□□ -0.81
Trim41Q5NCC3 Gm42819-201ENSMUST00000199630 5121 ntBASIC10□□□□□ -0.81
Trim41Q5NCC3 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim41Q5NCC3 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trim41Q5NCC3 Gm6584-201ENSMUST00000119671 447 ntBASIC10□□□□□ -0.81
Trim41Q5NCC3 Gm12190-201ENSMUST00000120001 187 ntBASIC10□□□□□ -0.81
Trim41Q5NCC3 Gm12094-201ENSMUST00000121781 472 ntBASIC10□□□□□ -0.81
Trim41Q5NCC3 n-R5s24-201ENSMUST00000122518 117 ntBASIC10□□□□□ -0.81
Trim41Q5NCC3 Gm24836-201ENSMUST00000122609 108 ntBASIC10□□□□□ -0.81
Trim41Q5NCC3 Gm10319-202ENSMUST00000159439 846 ntBASIC10□□□□□ -0.81
Trim41Q5NCC3 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trim41Q5NCC3 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC10□□□□□ -0.81
Trim41Q5NCC3 Gm5735-201ENSMUST00000207053 167 ntBASIC10□□□□□ -0.81
Trim41Q5NCC3 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC10□□□□□ -0.81
Trim41Q5NCC3 AC151833.1-201ENSMUST00000227752 574 ntBASIC10□□□□□ -0.81
Trim41Q5NCC3 Gm23795-201ENSMUST00000084006 137 ntBASIC10□□□□□ -0.81
Trim41Q5NCC3 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trim41Q5NCC3 Gm44735-201ENSMUST00000206197 1752 ntBASIC10□□□□□ -0.81
Trim41Q5NCC3 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Trim41Q5NCC3 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC10□□□□□ -0.81
Trim41Q5NCC3 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trim41Q5NCC3 Fus-202ENSMUST00000079045 2623 ntBASIC10□□□□□ -0.81
Trim41Q5NCC3 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Gm38377-201ENSMUST00000193253 3772 ntBASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Gm23941-201ENSMUST00000101953 107 ntBASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Olfr1235-ps1-201ENSMUST00000117898 314 ntBASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Gm5942-201ENSMUST00000120046 439 ntBASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Gm28654-201ENSMUST00000189801 379 ntBASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Gm44481-201ENSMUST00000197288 84 ntBASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Gm44339-201ENSMUST00000200598 84 ntBASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Gm43929-201ENSMUST00000203025 409 ntBASIC9.99□□□□□ -0.81
Trim41Q5NCC3 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC9.99□□□□□ -0.81
Trim41Q5NCC3 AC109172.1-201ENSMUST00000227503 187 ntBASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC9.99□□□□□ -0.81
Trim41Q5NCC3 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Trim41Q5NCC3 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC9.98□□□□□ -0.81
Trim41Q5NCC3 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC9.98□□□□□ -0.81
Trim41Q5NCC3 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trim41Q5NCC3 Gm14355-201ENSMUST00000117352 264 ntBASIC9.98□□□□□ -0.81
Trim41Q5NCC3 Gm13469-201ENSMUST00000118231 350 ntBASIC9.98□□□□□ -0.81
Trim41Q5NCC3 Gm14333-201ENSMUST00000130484 264 ntBASIC9.98□□□□□ -0.81
Trim41Q5NCC3 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Trim41Q5NCC3 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC9.98□□□□□ -0.81
Trim41Q5NCC3 Gm4761-201ENSMUST00000178086 582 ntBASIC9.98□□□□□ -0.81
Trim41Q5NCC3 Gm6501-201ENSMUST00000187178 916 ntBASIC9.98□□□□□ -0.81
Trim41Q5NCC3 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms