Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm13607-201ENSMUST00000117875 539 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm12071-201ENSMUST00000121968 469 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm16260-201ENSMUST00000155141 304 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm22034-201ENSMUST00000157283 134 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm27592-201ENSMUST00000157729 126 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm25490-201ENSMUST00000158734 130 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Mir3092-201ENSMUST00000174954 96 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm22174-201ENSMUST00000175050 125 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm22692-201ENSMUST00000175055 125 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm27634-201ENSMUST00000175060 126 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm26460-201ENSMUST00000175061 126 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm22460-201ENSMUST00000175269 124 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm24365-201ENSMUST00000175384 125 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm44310-201ENSMUST00000175424 126 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm22639-201ENSMUST00000175591 125 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm24979-201ENSMUST00000178626 126 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm27743-201ENSMUST00000185136 126 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm16419-201ENSMUST00000221057 625 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 AC118006.2-201ENSMUST00000224167 962 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Gm40020-201ENSMUST00000215677 1635 ntBASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc88bQ4QRL3 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc88bQ4QRL3 Mir8090-201ENSMUST00000185078 136 ntBASIC5.98□□□□□ -1.45
Ccdc88bQ4QRL3 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC5.98□□□□□ -1.45
Ccdc88bQ4QRL3 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc88bQ4QRL3 Gm8785-201ENSMUST00000220259 487 ntBASIC5.98□□□□□ -1.45
Ccdc88bQ4QRL3 CT010506.3-201ENSMUST00000223699 410 ntBASIC5.98□□□□□ -1.45
Ccdc88bQ4QRL3 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.98□□□□□ -1.45
Ccdc88bQ4QRL3 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc88bQ4QRL3 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc88bQ4QRL3 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.98□□□□□ -1.45
Ccdc88bQ4QRL3 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc88bQ4QRL3 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Gm13502-201ENSMUST00000121574 684 ntBASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Gm24936-201ENSMUST00000122598 247 ntBASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Gm25295-201ENSMUST00000122794 306 ntBASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Mir6916-201ENSMUST00000184514 63 ntBASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Gm2189-201ENSMUST00000201419 429 ntBASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 AC158631.2-201ENSMUST00000219999 478 ntBASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Gm21007-201ENSMUST00000221024 326 ntBASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Ube2nl-201ENSMUST00000085228 456 ntBASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Gm36944-201ENSMUST00000192257 2759 ntBASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Gm45176-201ENSMUST00000207696 4096 ntBASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 AC124572.2-201ENSMUST00000218041 5152 ntBASIC5.97□□□□□ -1.45
Ccdc88bQ4QRL3 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.96□□□□□ -1.45
Ccdc88bQ4QRL3 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ccdc88bQ4QRL3 Gm22023-201ENSMUST00000104354 130 ntBASIC5.96□□□□□ -1.45
Ccdc88bQ4QRL3 Gm12873-201ENSMUST00000119988 422 ntBASIC5.96□□□□□ -1.45
Ccdc88bQ4QRL3 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Ccdc88bQ4QRL3 Gm23855-201ENSMUST00000158377 135 ntBASIC5.96□□□□□ -1.45
Ccdc88bQ4QRL3 Gm19030-201ENSMUST00000194947 552 ntBASIC5.96□□□□□ -1.45
Ccdc88bQ4QRL3 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Ccdc88bQ4QRL3 AC121542.1-201ENSMUST00000227245 721 ntBASIC5.96□□□□□ -1.45
Ccdc88bQ4QRL3 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Ccdc88bQ4QRL3 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
Ccdc88bQ4QRL3 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Ccdc88bQ4QRL3 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
Ccdc88bQ4QRL3 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 Gm42447-201ENSMUST00000200102 2903 ntBASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 Gm13924-201ENSMUST00000119899 486 ntBASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 Gm24727-201ENSMUST00000158231 144 ntBASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 Gm25037-201ENSMUST00000175418 110 ntBASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 Gm5551-201ENSMUST00000199720 690 ntBASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
Ccdc88bQ4QRL3 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 Gm43845-201ENSMUST00000202462 1820 ntBASIC5.95□□□□□ -1.46
Ccdc88bQ4QRL3 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 267 ms