Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm29596-201ENSMUST00000185710 385 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 2610001A08Rik-201ENSMUST00000193315 867 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm18150-201ENSMUST00000195341 645 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm18340-201ENSMUST00000196342 609 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm7128-201ENSMUST00000211639 533 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm45499-201ENSMUST00000211656 280 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm34005-201ENSMUST00000215834 282 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm18891-201ENSMUST00000216734 1087 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm8158-201ENSMUST00000219220 465 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm8112-201ENSMUST00000219637 465 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm18704-201ENSMUST00000219736 446 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 AC131068.1-201ENSMUST00000226891 482 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm11251-201ENSMUST00000119593 2800 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 AC120153.1-201ENSMUST00000226502 1311 ntBASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Trim40Q3UWA4 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 AC153881.3-201ENSMUST00000218494 1561 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 n-R5s82-201ENSMUST00000104213 109 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm22019-201ENSMUST00000104359 96 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm13478-201ENSMUST00000118312 413 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm12090-201ENSMUST00000118692 758 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm14875-201ENSMUST00000120881 319 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm23792-201ENSMUST00000122557 93 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm5353-201ENSMUST00000139800 793 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm26034-201ENSMUST00000158154 116 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm15838-201ENSMUST00000161575 180 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm18604-201ENSMUST00000172535 558 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm20526-201ENSMUST00000173416 158 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm23638-201ENSMUST00000175073 126 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm23158-201ENSMUST00000175076 126 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm22907-201ENSMUST00000175198 126 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm22625-201ENSMUST00000175382 126 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm22875-201ENSMUST00000175449 126 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm25197-201ENSMUST00000175516 126 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm27857-201ENSMUST00000176930 126 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm26268-201ENSMUST00000177685 126 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm23681-201ENSMUST00000178821 126 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm27718-201ENSMUST00000183721 86 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Mir7037-201ENSMUST00000184414 65 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm27940-201ENSMUST00000184449 98 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm28920-201ENSMUST00000189957 699 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm44330-201ENSMUST00000200106 143 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm6719-201ENSMUST00000202067 335 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm45228-201ENSMUST00000206585 352 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm45735-201ENSMUST00000212779 319 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm19233-201ENSMUST00000219772 936 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Gm18338-201ENSMUST00000222381 560 ntBASIC3.89□□□□□ -1.79
Trim40Q3UWA4 4930568D16Rik-201ENSMUST00000028243 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim40Q3UWA4 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms