Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Gm26387-201ENSMUST00000104238 132 ntBASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Gm15364-201ENSMUST00000119618 585 ntBASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Gm14977-201ENSMUST00000121626 812 ntBASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Gm23816-201ENSMUST00000179617 132 ntBASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Gm28639-201ENSMUST00000191519 481 ntBASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Mir142-201ENSMUST00000198092 64 ntBASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Gm5885-202ENSMUST00000203357 528 ntBASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Gm19181-201ENSMUST00000218891 940 ntBASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 AC151907.1-201ENSMUST00000228812 412 ntBASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Gm37006-201ENSMUST00000195253 2674 ntBASIC4.07□□□□□ -1.76
Upf3bQ3ULL6 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Olfr616-201ENSMUST00000106886 954 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm11600-201ENSMUST00000119592 240 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm8244-201ENSMUST00000121254 264 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm13508-201ENSMUST00000121639 775 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm25427-201ENSMUST00000157605 103 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Mir3070b-201ENSMUST00000175205 89 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Mir713-201ENSMUST00000178651 108 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm37791-201ENSMUST00000195081 286 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm36954-201ENSMUST00000195362 363 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm38088-201ENSMUST00000195829 241 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm42625-201ENSMUST00000198611 922 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm2691-201ENSMUST00000203205 901 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm45553-201ENSMUST00000209929 507 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm45735-201ENSMUST00000212779 319 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 AC153544.1-201ENSMUST00000217988 400 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 AC162934.1-201ENSMUST00000222880 309 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 AC154838.2-201ENSMUST00000226602 747 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm10794-201ENSMUST00000099624 207 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Gm37655-201ENSMUST00000193968 4123 ntBASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
Upf3bQ3ULL6 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Gm13737-201ENSMUST00000119793 232 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Gm12486-201ENSMUST00000120887 541 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Gm16327-201ENSMUST00000137146 228 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Gm23112-201ENSMUST00000158606 125 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Scgb2a2-201ENSMUST00000179814 1107 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Gm28920-201ENSMUST00000189957 699 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Gm28872-201ENSMUST00000191518 158 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Olfr1449-204ENSMUST00000215325 1149 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 AC153948.1-201ENSMUST00000219080 3838 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
Upf3bQ3ULL6 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms