Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 AC192088.2-201ENSMUST00000227590 411 ntBASIC6.79□□□□□ -1.32
Col17a1Q07563 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col17a1Q07563 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col17a1Q07563 Gm42768-201ENSMUST00000197734 2897 ntBASIC6.79□□□□□ -1.32
Col17a1Q07563 Parp4-201ENSMUST00000161553 6387 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col17a1Q07563 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col17a1Q07563 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col17a1Q07563 Vmn2r7-202ENSMUST00000161972 3583 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Col17a1Q07563 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col17a1Q07563 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Col17a1Q07563 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col17a1Q07563 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.79□□□□□ -1.32
Col17a1Q07563 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col17a1Q07563 Ear-ps10-201ENSMUST00000161871 460 ntBASIC6.79□□□□□ -1.32
Col17a1Q07563 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC6.79□□□□□ -1.32
Col17a1Q07563 Gm28740-201ENSMUST00000186142 215 ntBASIC6.79□□□□□ -1.32
Col17a1Q07563 Gm28688-201ENSMUST00000187301 268 ntBASIC6.79□□□□□ -1.32
Col17a1Q07563 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC6.79□□□□□ -1.32
Col17a1Q07563 Gm18899-201ENSMUST00000217663 546 ntBASIC6.79□□□□□ -1.32
Col17a1Q07563 Ormdl2-202ENSMUST00000217685 666 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Col17a1Q07563 Gm17829-201ENSMUST00000219782 344 ntBASIC6.79□□□□□ -1.32
Col17a1Q07563 Gm3565-201ENSMUST00000222670 609 ntBASIC6.79□□□□□ -1.32
Col17a1Q07563 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Col17a1Q07563 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col17a1Q07563 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm43185-201ENSMUST00000197507 2775 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col17a1Q07563 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col17a1Q07563 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Col17a1Q07563 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
Col17a1Q07563 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col17a1Q07563 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm16421-201ENSMUST00000117616 1557 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Col17a1Q07563 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm12173-201ENSMUST00000117622 273 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm12294-201ENSMUST00000119723 490 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm14411-201ENSMUST00000121798 914 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm9498-201ENSMUST00000140849 291 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm24962-201ENSMUST00000157917 109 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm24393-201ENSMUST00000158135 97 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm16563-201ENSMUST00000162673 423 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col17a1Q07563 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm27899-201ENSMUST00000184715 64 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm27163-201ENSMUST00000184767 409 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm27392-201ENSMUST00000185041 101 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm20832-201ENSMUST00000189076 665 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm30638-201ENSMUST00000195570 656 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm36728-201ENSMUST00000195782 665 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm43967-201ENSMUST00000203787 301 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm44654-201ENSMUST00000208052 329 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 AC117814.1-201ENSMUST00000226135 352 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
Col17a1Q07563 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Col17a1Q07563 Olfr1356-201ENSMUST00000061289 963 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col17a1Q07563 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC6.78□□□□□ -1.32
Col17a1Q07563 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col17a1Q07563 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Col17a1Q07563 Gm37569-201ENSMUST00000192111 1722 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col17a1Q07563 Gm43428-201ENSMUST00000200108 3845 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 Gm15189-201ENSMUST00000121164 1966 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 Gm23133-201ENSMUST00000104255 135 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 Gm11623-201ENSMUST00000120176 1225 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 Gm20543-201ENSMUST00000174200 726 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 Gm5974-201ENSMUST00000181607 986 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 Gm42832-201ENSMUST00000196361 745 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 Gm44393-201ENSMUST00000197418 138 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC6.77□□□□□ -1.33
Col17a1Q07563 Gm46312-201ENSMUST00000220961 420 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 AC156560.1-201ENSMUST00000221425 256 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 AC124746.2-201ENSMUST00000226594 427 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Col17a1Q07563 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col17a1Q07563 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Col17a1Q07563 Gm43888-201ENSMUST00000204405 2587 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Col17a1Q07563 Gm36931-201ENSMUST00000192997 4801 ntBASIC6.77□□□□□ -1.33
Col17a1Q07563 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Col17a1Q07563 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col17a1Q07563 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Col17a1Q07563 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col17a1Q07563 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Col17a1Q07563 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Col17a1Q07563 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Col17a1Q07563 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col17a1Q07563 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC6.76□□□□□ -1.33
Col17a1Q07563 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 Gm12288-201ENSMUST00000121054 1282 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 Gm12893-201ENSMUST00000121732 275 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 Gm11471-201ENSMUST00000121824 198 ntBASIC6.76□□□□□ -1.33
Col17a1Q07563 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC6.76□□□□□ -1.33
Col17a1Q07563 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col17a1Q07563 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Col17a1Q07563 Gm23852-201ENSMUST00000158376 77 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 100.7 ms