Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Col9a1Q05722 Gm42679-201ENSMUST00000197086 2906 ntBASIC6.35□□□□□ -1.39
Col9a1Q05722 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Col9a1Q05722 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Col9a1Q05722 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 A830010M20Rik-203ENSMUST00000100951 4545 ntTSL 5 BASIC6.34□□□□□ -1.39
Col9a1Q05722 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Col9a1Q05722 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 D5Ertd577e-201ENSMUST00000094593 2462 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Prkaa1-202ENSMUST00000228218 4618 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm23750-201ENSMUST00000104222 132 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm13455-201ENSMUST00000118767 517 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm11600-201ENSMUST00000119592 240 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm23171-201ENSMUST00000157159 264 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm23537-201ENSMUST00000157536 330 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm24085-201ENSMUST00000175172 116 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm5058-201ENSMUST00000187331 463 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm37416-201ENSMUST00000193596 318 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm43402-201ENSMUST00000197159 159 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm19060-201ENSMUST00000201959 421 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm44111-201ENSMUST00000204649 399 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm45156-201ENSMUST00000207255 439 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm46379-201ENSMUST00000222551 265 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 AL807824.1-201ENSMUST00000223151 183 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 AC154282.1-201ENSMUST00000223154 265 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 AC123665.4-201ENSMUST00000228790 249 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm5830-201ENSMUST00000049117 443 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Mir346-201ENSMUST00000083547 98 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm37137-201ENSMUST00000195138 2684 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
Col9a1Q05722 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Col9a1Q05722 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm38190-201ENSMUST00000192350 4755 ntBASIC6.34□□□□□ -1.39
Col9a1Q05722 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Col9a1Q05722 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Col9a1Q05722 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Col9a1Q05722 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Col9a1Q05722 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Col9a1Q05722 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Col9a1Q05722 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col9a1Q05722 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Col9a1Q05722 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.4
Col9a1Q05722 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Col9a1Q05722 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Col9a1Q05722 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col9a1Q05722 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm44860-201ENSMUST00000208473 2346 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col9a1Q05722 Stx19-201ENSMUST00000055557 2812 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col9a1Q05722 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Col9a1Q05722 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col9a1Q05722 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Col9a1Q05722 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm24423-201ENSMUST00000101982 106 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm26078-201ENSMUST00000104067 128 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 n-R5s52-201ENSMUST00000104614 113 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm12779-201ENSMUST00000121496 143 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm24629-201ENSMUST00000122762 89 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm24630-201ENSMUST00000122768 106 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm25624-201ENSMUST00000157222 275 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm26310-201ENSMUST00000157766 117 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm23280-201ENSMUST00000157905 139 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm24348-201ENSMUST00000158710 130 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm23921-201ENSMUST00000175258 107 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Rian-203ENSMUST00000181527 989 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm37624-201ENSMUST00000193751 219 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm44076-201ENSMUST00000203072 520 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm44473-201ENSMUST00000204039 152 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm45122-201ENSMUST00000206376 784 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 Gm44533-201ENSMUST00000207782 268 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 AC102287.1-201ENSMUST00000211412 454 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Col9a1Q05722 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 AC156559.1-201ENSMUST00000224158 222 ntBASIC6.33□□□□□ -1.4
Col9a1Q05722 CT025689.2-201ENSMUST00000224979 429 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms