Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm42725-201ENSMUST00000199296 4193 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Mir759-201ENSMUST00000103254 98 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm23431-201ENSMUST00000104006 107 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a1Q04857 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm8475-201ENSMUST00000118211 526 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm13220-201ENSMUST00000121535 508 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm13149-201ENSMUST00000122071 339 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm22789-201ENSMUST00000157884 130 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Scarna13-201ENSMUST00000158164 275 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm15812-201ENSMUST00000162331 748 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC5.93□□□□□ -1.46
Col6a1Q04857 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm43114-201ENSMUST00000198298 343 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm44634-201ENSMUST00000206119 152 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.93□□□□□ -1.46
Col6a1Q04857 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 AC139294.1-201ENSMUST00000226708 571 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm25141-201ENSMUST00000083177 107 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a1Q04857 Gm44026-201ENSMUST00000203985 2088 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a1Q04857 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a1Q04857 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Col6a1Q04857 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Col6a1Q04857 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC5.93□□□□□ -1.46
Col6a1Q04857 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.92□□□□□ -1.46
Col6a1Q04857 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a1Q04857 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Col6a1Q04857 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a1Q04857 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a1Q04857 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm14082-201ENSMUST00000118582 801 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm9308-201ENSMUST00000119073 448 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm14534-201ENSMUST00000120045 357 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm14852-201ENSMUST00000120065 647 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm11321-201ENSMUST00000121257 902 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm23542-201ENSMUST00000158208 96 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm27976-201ENSMUST00000183635 162 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Mir6410-201ENSMUST00000184204 104 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm29105-201ENSMUST00000187256 450 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm29556-201ENSMUST00000187591 696 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm43070-201ENSMUST00000196938 415 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm43494-201ENSMUST00000197672 388 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm29781-201ENSMUST00000203862 478 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm4501-201ENSMUST00000207330 551 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm4558-201ENSMUST00000207886 521 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm4528-201ENSMUST00000207905 551 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC5.92□□□□□ -1.46
Col6a1Q04857 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm3442-201ENSMUST00000216808 710 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm8942-201ENSMUST00000217892 400 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm20304-201ENSMUST00000218168 444 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm2436-201ENSMUST00000219562 774 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 AC174082.1-201ENSMUST00000221106 307 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a1Q04857 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm22265-201ENSMUST00000082947 116 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a1Q04857 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col6a1Q04857 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col6a1Q04857 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a1Q04857 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Col6a1Q04857 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.92□□□□□ -1.46
Col6a1Q04857 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Col6a1Q04857 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Col6a1Q04857 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col6a1Q04857 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.91□□□□□ -1.46
Col6a1Q04857 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms